Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22135 | 66628;66629;66630 | chr2:178581966;178581965;178581964 | chr2:179446693;179446692;179446691 |
N2AB | 20494 | 61705;61706;61707 | chr2:178581966;178581965;178581964 | chr2:179446693;179446692;179446691 |
N2A | 19567 | 58924;58925;58926 | chr2:178581966;178581965;178581964 | chr2:179446693;179446692;179446691 |
N2B | 13070 | 39433;39434;39435 | chr2:178581966;178581965;178581964 | chr2:179446693;179446692;179446691 |
Novex-1 | 13195 | 39808;39809;39810 | chr2:178581966;178581965;178581964 | chr2:179446693;179446692;179446691 |
Novex-2 | 13262 | 40009;40010;40011 | chr2:178581966;178581965;178581964 | chr2:179446693;179446692;179446691 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.067 | N | 0.369 | 0.167 | 0.202949470691 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3374 | likely_benign | 0.3176 | benign | 0.009 | Stabilizing | 0.968 | D | 0.564 | neutral | None | None | None | None | I |
K/C | 0.7856 | likely_pathogenic | 0.7814 | pathogenic | -0.138 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
K/D | 0.7321 | likely_pathogenic | 0.6977 | pathogenic | 0.001 | Stabilizing | 0.938 | D | 0.571 | neutral | None | None | None | None | I |
K/E | 0.3054 | likely_benign | 0.2674 | benign | -0.01 | Destabilizing | 0.067 | N | 0.369 | neutral | N | 0.422645766 | None | None | I |
K/F | 0.862 | likely_pathogenic | 0.8453 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | I |
K/G | 0.617 | likely_pathogenic | 0.6132 | pathogenic | -0.162 | Destabilizing | 0.991 | D | 0.521 | neutral | None | None | None | None | I |
K/H | 0.4301 | ambiguous | 0.4109 | ambiguous | -0.497 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | I |
K/I | 0.3938 | ambiguous | 0.3637 | ambiguous | 0.376 | Stabilizing | 0.994 | D | 0.651 | neutral | N | 0.49235378 | None | None | I |
K/L | 0.4048 | ambiguous | 0.3973 | ambiguous | 0.376 | Stabilizing | 0.991 | D | 0.533 | neutral | None | None | None | None | I |
K/M | 0.3122 | likely_benign | 0.2813 | benign | 0.281 | Stabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | I |
K/N | 0.6001 | likely_pathogenic | 0.5731 | pathogenic | 0.291 | Stabilizing | 0.988 | D | 0.603 | neutral | D | 0.524002052 | None | None | I |
K/P | 0.8036 | likely_pathogenic | 0.8312 | pathogenic | 0.281 | Stabilizing | 0.995 | D | 0.62 | neutral | None | None | None | None | I |
K/Q | 0.1775 | likely_benign | 0.1642 | benign | 0.077 | Stabilizing | 0.976 | D | 0.587 | neutral | N | 0.491948348 | None | None | I |
K/R | 0.0836 | likely_benign | 0.0858 | benign | 0.013 | Stabilizing | 0.958 | D | 0.46 | neutral | N | 0.4888894 | None | None | I |
K/S | 0.547 | ambiguous | 0.5194 | ambiguous | -0.175 | Destabilizing | 0.968 | D | 0.537 | neutral | None | None | None | None | I |
K/T | 0.2719 | likely_benign | 0.2525 | benign | -0.049 | Destabilizing | 0.988 | D | 0.573 | neutral | N | 0.479307125 | None | None | I |
K/V | 0.3463 | ambiguous | 0.3199 | benign | 0.281 | Stabilizing | 0.995 | D | 0.601 | neutral | None | None | None | None | I |
K/W | 0.8906 | likely_pathogenic | 0.8782 | pathogenic | -0.33 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
K/Y | 0.7649 | likely_pathogenic | 0.7385 | pathogenic | 0.039 | Stabilizing | 0.998 | D | 0.638 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.