Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2216 | 6871;6872;6873 | chr2:178775065;178775064;178775063 | chr2:179639792;179639791;179639790 |
N2AB | 2216 | 6871;6872;6873 | chr2:178775065;178775064;178775063 | chr2:179639792;179639791;179639790 |
N2A | 2216 | 6871;6872;6873 | chr2:178775065;178775064;178775063 | chr2:179639792;179639791;179639790 |
N2B | 2170 | 6733;6734;6735 | chr2:178775065;178775064;178775063 | chr2:179639792;179639791;179639790 |
Novex-1 | 2170 | 6733;6734;6735 | chr2:178775065;178775064;178775063 | chr2:179639792;179639791;179639790 |
Novex-2 | 2170 | 6733;6734;6735 | chr2:178775065;178775064;178775063 | chr2:179639792;179639791;179639790 |
Novex-3 | 2216 | 6871;6872;6873 | chr2:178775065;178775064;178775063 | chr2:179639792;179639791;179639790 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.003 | N | 0.133 | 0.167 | 0.0666544352282 | gnomAD-4.0.0 | 1.59077E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0479 | likely_benign | 0.0469 | benign | -0.313 | Destabilizing | None | N | 0.071 | neutral | N | 0.434125916 | None | None | N |
E/C | 0.3437 | ambiguous | 0.3402 | ambiguous | -0.183 | Destabilizing | 0.245 | N | 0.385 | neutral | None | None | None | None | N |
E/D | 0.1077 | likely_benign | 0.1099 | benign | -0.325 | Destabilizing | 0.003 | N | 0.133 | neutral | N | 0.47794347 | None | None | N |
E/F | 0.4105 | ambiguous | 0.4094 | ambiguous | -0.105 | Destabilizing | 0.085 | N | 0.46 | neutral | None | None | None | None | N |
E/G | 0.0729 | likely_benign | 0.0717 | benign | -0.51 | Destabilizing | None | N | 0.085 | neutral | N | 0.511920377 | None | None | N |
E/H | 0.2107 | likely_benign | 0.2179 | benign | 0.281 | Stabilizing | 0.245 | N | 0.191 | neutral | None | None | None | None | N |
E/I | 0.1532 | likely_benign | 0.1496 | benign | 0.173 | Stabilizing | 0.022 | N | 0.418 | neutral | None | None | None | None | N |
E/K | 0.1275 | likely_benign | 0.1358 | benign | 0.308 | Stabilizing | 0.003 | N | 0.145 | neutral | N | 0.487725552 | None | None | N |
E/L | 0.1525 | likely_benign | 0.1504 | benign | 0.173 | Stabilizing | 0.004 | N | 0.289 | neutral | None | None | None | None | N |
E/M | 0.1796 | likely_benign | 0.1749 | benign | 0.113 | Stabilizing | 0.245 | N | 0.371 | neutral | None | None | None | None | N |
E/N | 0.1231 | likely_benign | 0.1208 | benign | -0.077 | Destabilizing | 0.009 | N | 0.149 | neutral | None | None | None | None | N |
E/P | 0.1085 | likely_benign | 0.105 | benign | 0.031 | Stabilizing | None | N | 0.087 | neutral | None | None | None | None | N |
E/Q | 0.0919 | likely_benign | 0.0932 | benign | -0.028 | Destabilizing | 0.014 | N | 0.202 | neutral | N | 0.496956759 | None | None | N |
E/R | 0.1692 | likely_benign | 0.1824 | benign | 0.604 | Stabilizing | 0.018 | N | 0.166 | neutral | None | None | None | None | N |
E/S | 0.054 | likely_benign | 0.052 | benign | -0.235 | Destabilizing | None | N | 0.065 | neutral | None | None | None | None | N |
E/T | 0.0632 | likely_benign | 0.0608 | benign | -0.068 | Destabilizing | None | N | 0.069 | neutral | None | None | None | None | N |
E/V | 0.1078 | likely_benign | 0.1066 | benign | 0.031 | Stabilizing | 0.003 | N | 0.233 | neutral | N | 0.503397232 | None | None | N |
E/W | 0.6093 | likely_pathogenic | 0.6243 | pathogenic | 0.06 | Stabilizing | 0.788 | D | 0.364 | neutral | None | None | None | None | N |
E/Y | 0.2818 | likely_benign | 0.2894 | benign | 0.144 | Stabilizing | 0.085 | N | 0.435 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.