Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22202 | 66829;66830;66831 | chr2:178581664;178581663;178581662 | chr2:179446391;179446390;179446389 |
N2AB | 20561 | 61906;61907;61908 | chr2:178581664;178581663;178581662 | chr2:179446391;179446390;179446389 |
N2A | 19634 | 59125;59126;59127 | chr2:178581664;178581663;178581662 | chr2:179446391;179446390;179446389 |
N2B | 13137 | 39634;39635;39636 | chr2:178581664;178581663;178581662 | chr2:179446391;179446390;179446389 |
Novex-1 | 13262 | 40009;40010;40011 | chr2:178581664;178581663;178581662 | chr2:179446391;179446390;179446389 |
Novex-2 | 13329 | 40210;40211;40212 | chr2:178581664;178581663;178581662 | chr2:179446391;179446390;179446389 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs1224096976 | 0.353 | 0.055 | N | 0.287 | 0.082 | 0.141422826196 | gnomAD-4.0.0 | 3.18729E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72403E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1508 | likely_benign | 0.1462 | benign | -0.362 | Destabilizing | 0.016 | N | 0.311 | neutral | None | None | None | None | N |
N/C | 0.2307 | likely_benign | 0.2172 | benign | 0.283 | Stabilizing | 0.864 | D | 0.312 | neutral | None | None | None | None | N |
N/D | 0.1107 | likely_benign | 0.1068 | benign | 0.194 | Stabilizing | None | N | 0.101 | neutral | N | 0.357324851 | None | None | N |
N/E | 0.232 | likely_benign | 0.2165 | benign | 0.158 | Stabilizing | 0.001 | N | 0.138 | neutral | None | None | None | None | N |
N/F | 0.4417 | ambiguous | 0.4287 | ambiguous | -0.769 | Destabilizing | 0.214 | N | 0.333 | neutral | None | None | None | None | N |
N/G | 0.239 | likely_benign | 0.2332 | benign | -0.525 | Destabilizing | None | N | 0.119 | neutral | None | None | None | None | N |
N/H | 0.0872 | likely_benign | 0.0858 | benign | -0.515 | Destabilizing | None | N | 0.141 | neutral | N | 0.423339199 | None | None | N |
N/I | 0.1646 | likely_benign | 0.1584 | benign | -0.022 | Destabilizing | 0.029 | N | 0.335 | neutral | N | 0.42503271 | None | None | N |
N/K | 0.2446 | likely_benign | 0.2353 | benign | 0.068 | Stabilizing | 0.055 | N | 0.287 | neutral | N | 0.396805959 | None | None | N |
N/L | 0.1781 | likely_benign | 0.185 | benign | -0.022 | Destabilizing | 0.038 | N | 0.356 | neutral | None | None | None | None | N |
N/M | 0.2916 | likely_benign | 0.2725 | benign | 0.209 | Stabilizing | 0.356 | N | 0.308 | neutral | None | None | None | None | N |
N/P | 0.6222 | likely_pathogenic | 0.6636 | pathogenic | -0.109 | Destabilizing | 0.136 | N | 0.355 | neutral | None | None | None | None | N |
N/Q | 0.2233 | likely_benign | 0.208 | benign | -0.314 | Destabilizing | 0.072 | N | 0.268 | neutral | None | None | None | None | N |
N/R | 0.2677 | likely_benign | 0.2614 | benign | 0.123 | Stabilizing | 0.072 | N | 0.273 | neutral | None | None | None | None | N |
N/S | 0.0738 | likely_benign | 0.0717 | benign | -0.129 | Destabilizing | 0.024 | N | 0.363 | neutral | N | 0.394245656 | None | None | N |
N/T | 0.0918 | likely_benign | 0.0864 | benign | -0.022 | Destabilizing | 0.055 | N | 0.287 | neutral | N | 0.389418626 | None | None | N |
N/V | 0.1602 | likely_benign | 0.1525 | benign | -0.109 | Destabilizing | 0.001 | N | 0.342 | neutral | None | None | None | None | N |
N/W | 0.7406 | likely_pathogenic | 0.7265 | pathogenic | -0.783 | Destabilizing | 0.864 | D | 0.326 | neutral | None | None | None | None | N |
N/Y | 0.1559 | likely_benign | 0.1578 | benign | -0.511 | Destabilizing | 0.093 | N | 0.335 | neutral | N | 0.467226049 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.