Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2221 | 6886;6887;6888 | chr2:178775050;178775049;178775048 | chr2:179639777;179639776;179639775 |
N2AB | 2221 | 6886;6887;6888 | chr2:178775050;178775049;178775048 | chr2:179639777;179639776;179639775 |
N2A | 2221 | 6886;6887;6888 | chr2:178775050;178775049;178775048 | chr2:179639777;179639776;179639775 |
N2B | 2175 | 6748;6749;6750 | chr2:178775050;178775049;178775048 | chr2:179639777;179639776;179639775 |
Novex-1 | 2175 | 6748;6749;6750 | chr2:178775050;178775049;178775048 | chr2:179639777;179639776;179639775 |
Novex-2 | 2175 | 6748;6749;6750 | chr2:178775050;178775049;178775048 | chr2:179639777;179639776;179639775 |
Novex-3 | 2221 | 6886;6887;6888 | chr2:178775050;178775049;178775048 | chr2:179639777;179639776;179639775 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.656 | N | 0.521 | 0.185 | 0.28722502521 | gnomAD-4.0.0 | 1.5908E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85683E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8412 | likely_pathogenic | 0.8591 | pathogenic | -0.163 | Destabilizing | 0.754 | D | 0.589 | neutral | None | None | None | None | N |
R/C | 0.4444 | ambiguous | 0.4564 | ambiguous | 0.02 | Stabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | N |
R/D | 0.9392 | likely_pathogenic | 0.9479 | pathogenic | 0.112 | Stabilizing | 0.956 | D | 0.627 | neutral | None | None | None | None | N |
R/E | 0.7137 | likely_pathogenic | 0.7388 | pathogenic | 0.219 | Stabilizing | 0.86 | D | 0.575 | neutral | None | None | None | None | N |
R/F | 0.8359 | likely_pathogenic | 0.8624 | pathogenic | -0.113 | Destabilizing | 0.978 | D | 0.707 | prob.neutral | None | None | None | None | N |
R/G | 0.7512 | likely_pathogenic | 0.7847 | pathogenic | -0.445 | Destabilizing | 0.822 | D | 0.573 | neutral | N | 0.50724639 | None | None | N |
R/H | 0.2079 | likely_benign | 0.2216 | benign | -1.032 | Destabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | N |
R/I | 0.572 | likely_pathogenic | 0.608 | pathogenic | 0.573 | Stabilizing | 0.915 | D | 0.709 | prob.delet. | None | None | None | None | N |
R/K | 0.2146 | likely_benign | 0.2267 | benign | -0.064 | Destabilizing | 0.656 | D | 0.521 | neutral | N | 0.482878303 | None | None | N |
R/L | 0.5219 | ambiguous | 0.5465 | ambiguous | 0.573 | Stabilizing | 0.754 | D | 0.575 | neutral | None | None | None | None | N |
R/M | 0.6647 | likely_pathogenic | 0.7043 | pathogenic | 0.163 | Stabilizing | 0.992 | D | 0.675 | prob.neutral | D | 0.574403267 | None | None | N |
R/N | 0.8891 | likely_pathogenic | 0.9026 | pathogenic | 0.394 | Stabilizing | 0.956 | D | 0.607 | neutral | None | None | None | None | N |
R/P | 0.9836 | likely_pathogenic | 0.9851 | pathogenic | 0.35 | Stabilizing | 0.978 | D | 0.711 | prob.delet. | None | None | None | None | N |
R/Q | 0.2086 | likely_benign | 0.223 | benign | 0.273 | Stabilizing | 0.978 | D | 0.619 | neutral | None | None | None | None | N |
R/S | 0.8592 | likely_pathogenic | 0.8752 | pathogenic | -0.127 | Destabilizing | 0.698 | D | 0.61 | neutral | N | 0.507771269 | None | None | N |
R/T | 0.6997 | likely_pathogenic | 0.7264 | pathogenic | 0.15 | Stabilizing | 0.014 | N | 0.357 | neutral | N | 0.511817793 | None | None | N |
R/V | 0.6743 | likely_pathogenic | 0.698 | pathogenic | 0.35 | Stabilizing | 0.915 | D | 0.603 | neutral | None | None | None | None | N |
R/W | 0.4192 | ambiguous | 0.4696 | ambiguous | 0.013 | Stabilizing | 0.997 | D | 0.707 | prob.neutral | D | 0.656819331 | None | None | N |
R/Y | 0.7372 | likely_pathogenic | 0.7718 | pathogenic | 0.369 | Stabilizing | 0.993 | D | 0.709 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.