Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22218 | 66877;66878;66879 | chr2:178581616;178581615;178581614 | chr2:179446343;179446342;179446341 |
N2AB | 20577 | 61954;61955;61956 | chr2:178581616;178581615;178581614 | chr2:179446343;179446342;179446341 |
N2A | 19650 | 59173;59174;59175 | chr2:178581616;178581615;178581614 | chr2:179446343;179446342;179446341 |
N2B | 13153 | 39682;39683;39684 | chr2:178581616;178581615;178581614 | chr2:179446343;179446342;179446341 |
Novex-1 | 13278 | 40057;40058;40059 | chr2:178581616;178581615;178581614 | chr2:179446343;179446342;179446341 |
Novex-2 | 13345 | 40258;40259;40260 | chr2:178581616;178581615;178581614 | chr2:179446343;179446342;179446341 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1210761677 | -0.32 | None | N | 0.223 | 0.083 | 0.0666544352282 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
E/D | rs1210761677 | -0.32 | None | N | 0.223 | 0.083 | 0.0666544352282 | gnomAD-4.0.0 | 7.96772E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72433E-06 | 0 | 9.09146E-05 |
E/V | rs2047762977 | None | None | N | 0.267 | 0.203 | 0.32980341726 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.42E-05 | 0 | 0 | 0 | 0 |
E/V | rs2047762977 | None | None | N | 0.267 | 0.203 | 0.32980341726 | gnomAD-4.0.0 | 6.57739E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.41797E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2265 | likely_benign | 0.2264 | benign | -0.998 | Destabilizing | 0.011 | N | 0.244 | neutral | N | 0.455027543 | None | None | N |
E/C | 0.8129 | likely_pathogenic | 0.804 | pathogenic | -0.357 | Destabilizing | 0.781 | D | 0.418 | neutral | None | None | None | None | N |
E/D | 0.2987 | likely_benign | 0.2938 | benign | -0.742 | Destabilizing | None | N | 0.223 | neutral | N | 0.497412883 | None | None | N |
E/F | 0.8271 | likely_pathogenic | 0.8287 | pathogenic | -0.514 | Destabilizing | 0.142 | N | 0.535 | neutral | None | None | None | None | N |
E/G | 0.4945 | ambiguous | 0.4894 | ambiguous | -1.295 | Destabilizing | 0.049 | N | 0.309 | neutral | N | 0.498453033 | None | None | N |
E/H | 0.5555 | ambiguous | 0.5668 | pathogenic | -0.54 | Destabilizing | 0.54 | D | 0.406 | neutral | None | None | None | None | N |
E/I | 0.2201 | likely_benign | 0.2381 | benign | -0.201 | Destabilizing | 0.033 | N | 0.279 | neutral | None | None | None | None | N |
E/K | 0.2476 | likely_benign | 0.2673 | benign | -0.096 | Destabilizing | 0.049 | N | 0.35 | neutral | N | 0.432785402 | None | None | N |
E/L | 0.3372 | likely_benign | 0.3554 | ambiguous | -0.201 | Destabilizing | None | N | 0.361 | neutral | None | None | None | None | N |
E/M | 0.4037 | ambiguous | 0.4149 | ambiguous | 0.191 | Stabilizing | 0.367 | N | 0.485 | neutral | None | None | None | None | N |
E/N | 0.3955 | ambiguous | 0.3732 | ambiguous | -0.686 | Destabilizing | 0.001 | N | 0.211 | neutral | None | None | None | None | N |
E/P | 0.7656 | likely_pathogenic | 0.758 | pathogenic | -0.447 | Destabilizing | 0.251 | N | 0.443 | neutral | None | None | None | None | N |
E/Q | 0.1689 | likely_benign | 0.177 | benign | -0.592 | Destabilizing | 0.111 | N | 0.397 | neutral | N | 0.467610051 | None | None | N |
E/R | 0.3789 | ambiguous | 0.3917 | ambiguous | 0.147 | Stabilizing | 0.142 | N | 0.358 | neutral | None | None | None | None | N |
E/S | 0.314 | likely_benign | 0.3085 | benign | -0.902 | Destabilizing | 0.033 | N | 0.259 | neutral | None | None | None | None | N |
E/T | 0.1549 | likely_benign | 0.1493 | benign | -0.638 | Destabilizing | None | N | 0.213 | neutral | None | None | None | None | N |
E/V | 0.1286 | likely_benign | 0.1401 | benign | -0.447 | Destabilizing | None | N | 0.267 | neutral | N | 0.404502722 | None | None | N |
E/W | 0.9566 | likely_pathogenic | 0.9551 | pathogenic | -0.17 | Destabilizing | 0.931 | D | 0.439 | neutral | None | None | None | None | N |
E/Y | 0.7779 | likely_pathogenic | 0.7779 | pathogenic | -0.223 | Destabilizing | 0.54 | D | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.