Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22220 | 66883;66884;66885 | chr2:178581610;178581609;178581608 | chr2:179446337;179446336;179446335 |
N2AB | 20579 | 61960;61961;61962 | chr2:178581610;178581609;178581608 | chr2:179446337;179446336;179446335 |
N2A | 19652 | 59179;59180;59181 | chr2:178581610;178581609;178581608 | chr2:179446337;179446336;179446335 |
N2B | 13155 | 39688;39689;39690 | chr2:178581610;178581609;178581608 | chr2:179446337;179446336;179446335 |
Novex-1 | 13280 | 40063;40064;40065 | chr2:178581610;178581609;178581608 | chr2:179446337;179446336;179446335 |
Novex-2 | 13347 | 40264;40265;40266 | chr2:178581610;178581609;178581608 | chr2:179446337;179446336;179446335 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | N | 0.807 | 0.431 | 0.495706241231 | gnomAD-4.0.0 | 1.36926E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31949E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0971 | likely_benign | 0.0899 | benign | -0.474 | Destabilizing | 0.999 | D | 0.505 | neutral | N | 0.507477948 | None | None | N |
T/C | 0.3782 | ambiguous | 0.3453 | ambiguous | -0.342 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
T/D | 0.461 | ambiguous | 0.4148 | ambiguous | 0.404 | Stabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
T/E | 0.3099 | likely_benign | 0.2741 | benign | 0.331 | Stabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
T/F | 0.3801 | ambiguous | 0.3307 | benign | -1.005 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
T/G | 0.2362 | likely_benign | 0.2287 | benign | -0.592 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
T/H | 0.2345 | likely_benign | 0.2122 | benign | -0.877 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
T/I | 0.2267 | likely_benign | 0.2028 | benign | -0.285 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.475767012 | None | None | N |
T/K | 0.1341 | likely_benign | 0.1202 | benign | -0.272 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
T/L | 0.1346 | likely_benign | 0.1158 | benign | -0.285 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
T/M | 0.1196 | likely_benign | 0.1062 | benign | -0.1 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
T/N | 0.1433 | likely_benign | 0.1319 | benign | -0.103 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.470687676 | None | None | N |
T/P | 0.1126 | likely_benign | 0.0985 | benign | -0.32 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.505784437 | None | None | N |
T/Q | 0.1898 | likely_benign | 0.1724 | benign | -0.316 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
T/R | 0.1447 | likely_benign | 0.1277 | benign | -0.039 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
T/S | 0.1199 | likely_benign | 0.1107 | benign | -0.366 | Destabilizing | 0.999 | D | 0.496 | neutral | N | 0.490486911 | None | None | N |
T/V | 0.1666 | likely_benign | 0.1545 | benign | -0.32 | Destabilizing | 0.999 | D | 0.582 | neutral | None | None | None | None | N |
T/W | 0.6876 | likely_pathogenic | 0.634 | pathogenic | -0.981 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
T/Y | 0.376 | ambiguous | 0.3303 | benign | -0.696 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.