Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22228 | 66907;66908;66909 | chr2:178581586;178581585;178581584 | chr2:179446313;179446312;179446311 |
N2AB | 20587 | 61984;61985;61986 | chr2:178581586;178581585;178581584 | chr2:179446313;179446312;179446311 |
N2A | 19660 | 59203;59204;59205 | chr2:178581586;178581585;178581584 | chr2:179446313;179446312;179446311 |
N2B | 13163 | 39712;39713;39714 | chr2:178581586;178581585;178581584 | chr2:179446313;179446312;179446311 |
Novex-1 | 13288 | 40087;40088;40089 | chr2:178581586;178581585;178581584 | chr2:179446313;179446312;179446311 |
Novex-2 | 13355 | 40288;40289;40290 | chr2:178581586;178581585;178581584 | chr2:179446313;179446312;179446311 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1170889599 | -2.211 | 1.0 | D | 0.853 | 0.838 | 0.840859371154 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.63E-05 | None | 0 | None | 0 | 0 | 0 |
Y/H | rs1170889599 | -2.211 | 1.0 | D | 0.853 | 0.838 | 0.840859371154 | gnomAD-4.0.0 | 1.59384E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78722E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.996 | likely_pathogenic | 0.997 | pathogenic | -3.067 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
Y/C | 0.943 | likely_pathogenic | 0.9557 | pathogenic | -1.698 | Destabilizing | 1.0 | D | 0.89 | deleterious | D | 0.654594887 | None | None | N |
Y/D | 0.9971 | likely_pathogenic | 0.9975 | pathogenic | -3.784 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | D | 0.686865774 | None | None | N |
Y/E | 0.9987 | likely_pathogenic | 0.9989 | pathogenic | -3.561 | Highly Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
Y/F | 0.4334 | ambiguous | 0.4391 | ambiguous | -1.195 | Destabilizing | 0.999 | D | 0.769 | deleterious | D | 0.619114774 | None | None | N |
Y/G | 0.9861 | likely_pathogenic | 0.989 | pathogenic | -3.484 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
Y/H | 0.9797 | likely_pathogenic | 0.9822 | pathogenic | -2.347 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.686865774 | None | None | N |
Y/I | 0.98 | likely_pathogenic | 0.9831 | pathogenic | -1.662 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/K | 0.9988 | likely_pathogenic | 0.9991 | pathogenic | -2.448 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
Y/L | 0.9554 | likely_pathogenic | 0.9608 | pathogenic | -1.662 | Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
Y/M | 0.9885 | likely_pathogenic | 0.9908 | pathogenic | -1.363 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
Y/N | 0.9789 | likely_pathogenic | 0.9832 | pathogenic | -3.361 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.686663969 | None | None | N |
Y/P | 0.999 | likely_pathogenic | 0.9991 | pathogenic | -2.149 | Highly Destabilizing | 1.0 | D | 0.926 | deleterious | None | None | None | None | N |
Y/Q | 0.9978 | likely_pathogenic | 0.9984 | pathogenic | -3.039 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
Y/R | 0.9959 | likely_pathogenic | 0.9969 | pathogenic | -2.349 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
Y/S | 0.99 | likely_pathogenic | 0.9919 | pathogenic | -3.592 | Highly Destabilizing | 1.0 | D | 0.912 | deleterious | D | 0.686865774 | None | None | N |
Y/T | 0.9967 | likely_pathogenic | 0.9974 | pathogenic | -3.244 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
Y/V | 0.9591 | likely_pathogenic | 0.9667 | pathogenic | -2.149 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Y/W | 0.8916 | likely_pathogenic | 0.9004 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.