Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22233 | 66922;66923;66924 | chr2:178581571;178581570;178581569 | chr2:179446298;179446297;179446296 |
N2AB | 20592 | 61999;62000;62001 | chr2:178581571;178581570;178581569 | chr2:179446298;179446297;179446296 |
N2A | 19665 | 59218;59219;59220 | chr2:178581571;178581570;178581569 | chr2:179446298;179446297;179446296 |
N2B | 13168 | 39727;39728;39729 | chr2:178581571;178581570;178581569 | chr2:179446298;179446297;179446296 |
Novex-1 | 13293 | 40102;40103;40104 | chr2:178581571;178581570;178581569 | chr2:179446298;179446297;179446296 |
Novex-2 | 13360 | 40303;40304;40305 | chr2:178581571;178581570;178581569 | chr2:179446298;179446297;179446296 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs763250975 | -1.433 | None | N | 0.452 | 0.308 | 0.234412748748 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
Y/C | rs763250975 | -1.433 | None | N | 0.452 | 0.308 | 0.234412748748 | gnomAD-4.0.0 | 3.18792E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72597E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.4588 | ambiguous | 0.5123 | ambiguous | -3.325 | Highly Destabilizing | 0.002 | N | 0.561 | neutral | None | None | None | None | N |
Y/C | 0.1014 | likely_benign | 0.1107 | benign | -1.765 | Destabilizing | None | N | 0.452 | neutral | N | 0.379684422 | None | None | N |
Y/D | 0.7768 | likely_pathogenic | 0.8435 | pathogenic | -3.156 | Highly Destabilizing | 0.033 | N | 0.658 | neutral | N | 0.46732986 | None | None | N |
Y/E | 0.855 | likely_pathogenic | 0.8834 | pathogenic | -2.983 | Highly Destabilizing | 0.018 | N | 0.619 | neutral | None | None | None | None | N |
Y/F | 0.0987 | likely_benign | 0.1021 | benign | -1.274 | Destabilizing | None | N | 0.245 | neutral | N | 0.412026127 | None | None | N |
Y/G | 0.6088 | likely_pathogenic | 0.6637 | pathogenic | -3.706 | Highly Destabilizing | 0.009 | N | 0.609 | neutral | None | None | None | None | N |
Y/H | 0.2194 | likely_benign | 0.2636 | benign | -2.08 | Highly Destabilizing | 0.427 | N | 0.599 | neutral | N | 0.4843103 | None | None | N |
Y/I | 0.4268 | ambiguous | 0.4756 | ambiguous | -2.065 | Highly Destabilizing | None | N | 0.37 | neutral | None | None | None | None | N |
Y/K | 0.6009 | likely_pathogenic | 0.6576 | pathogenic | -2.107 | Highly Destabilizing | 0.018 | N | 0.613 | neutral | None | None | None | None | N |
Y/L | 0.3702 | ambiguous | 0.4308 | ambiguous | -2.065 | Highly Destabilizing | None | N | 0.345 | neutral | None | None | None | None | N |
Y/M | 0.4443 | ambiguous | 0.5112 | ambiguous | -1.725 | Destabilizing | 0.138 | N | 0.661 | neutral | None | None | None | None | N |
Y/N | 0.3634 | ambiguous | 0.4366 | ambiguous | -2.698 | Highly Destabilizing | 0.033 | N | 0.651 | neutral | N | 0.4843103 | None | None | N |
Y/P | 0.9904 | likely_pathogenic | 0.9942 | pathogenic | -2.497 | Highly Destabilizing | 0.085 | N | 0.641 | neutral | None | None | None | None | N |
Y/Q | 0.5796 | likely_pathogenic | 0.6371 | pathogenic | -2.557 | Highly Destabilizing | 0.085 | N | 0.666 | neutral | None | None | None | None | N |
Y/R | 0.4159 | ambiguous | 0.4657 | ambiguous | -1.673 | Destabilizing | 0.044 | N | 0.64 | neutral | None | None | None | None | N |
Y/S | 0.2031 | likely_benign | 0.244 | benign | -3.122 | Highly Destabilizing | None | N | 0.422 | neutral | N | 0.373430454 | None | None | N |
Y/T | 0.2784 | likely_benign | 0.3957 | ambiguous | -2.844 | Highly Destabilizing | None | N | 0.445 | neutral | None | None | None | None | N |
Y/V | 0.3205 | likely_benign | 0.381 | ambiguous | -2.497 | Highly Destabilizing | 0.004 | N | 0.507 | neutral | None | None | None | None | N |
Y/W | 0.4628 | ambiguous | 0.4943 | ambiguous | -0.553 | Destabilizing | 0.245 | N | 0.632 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.