Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22250 | 66973;66974;66975 | chr2:178581520;178581519;178581518 | chr2:179446247;179446246;179446245 |
N2AB | 20609 | 62050;62051;62052 | chr2:178581520;178581519;178581518 | chr2:179446247;179446246;179446245 |
N2A | 19682 | 59269;59270;59271 | chr2:178581520;178581519;178581518 | chr2:179446247;179446246;179446245 |
N2B | 13185 | 39778;39779;39780 | chr2:178581520;178581519;178581518 | chr2:179446247;179446246;179446245 |
Novex-1 | 13310 | 40153;40154;40155 | chr2:178581520;178581519;178581518 | chr2:179446247;179446246;179446245 |
Novex-2 | 13377 | 40354;40355;40356 | chr2:178581520;178581519;178581518 | chr2:179446247;179446246;179446245 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs928913814 | -1.614 | 0.999 | D | 0.775 | 0.233 | 0.497741790239 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/Q | rs928913814 | -1.614 | 0.999 | D | 0.775 | 0.233 | 0.497741790239 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
H/Q | rs928913814 | -1.614 | 0.999 | D | 0.775 | 0.233 | 0.497741790239 | gnomAD-4.0.0 | 4.99094E-06 | None | None | None | None | N | None | 1.33815E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.96897E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4609 | ambiguous | 0.4048 | ambiguous | -2.08 | Highly Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
H/C | 0.1709 | likely_benign | 0.1509 | benign | -1.057 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
H/D | 0.7121 | likely_pathogenic | 0.6946 | pathogenic | -2.11 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | D | 0.530397667 | None | None | N |
H/E | 0.6046 | likely_pathogenic | 0.5504 | ambiguous | -1.908 | Destabilizing | 0.998 | D | 0.613 | neutral | None | None | None | None | N |
H/F | 0.3074 | likely_benign | 0.2807 | benign | -0.06 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
H/G | 0.7084 | likely_pathogenic | 0.6762 | pathogenic | -2.513 | Highly Destabilizing | 0.998 | D | 0.737 | deleterious | None | None | None | None | N |
H/I | 0.19 | likely_benign | 0.1595 | benign | -0.783 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
H/K | 0.564 | ambiguous | 0.5101 | ambiguous | -1.261 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
H/L | 0.1691 | likely_benign | 0.1554 | benign | -0.783 | Destabilizing | 0.999 | D | 0.804 | deleterious | D | 0.530224309 | None | None | N |
H/M | 0.5093 | ambiguous | 0.4634 | ambiguous | -0.899 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
H/N | 0.23 | likely_benign | 0.2191 | benign | -2.032 | Highly Destabilizing | 0.997 | D | 0.611 | neutral | D | 0.530397667 | None | None | N |
H/P | 0.4423 | ambiguous | 0.4085 | ambiguous | -1.209 | Destabilizing | 0.999 | D | 0.84 | deleterious | D | 0.530917742 | None | None | N |
H/Q | 0.3952 | ambiguous | 0.3573 | ambiguous | -1.691 | Destabilizing | 0.999 | D | 0.775 | deleterious | D | 0.529530876 | None | None | N |
H/R | 0.3278 | likely_benign | 0.2946 | benign | -1.48 | Destabilizing | 0.999 | D | 0.765 | deleterious | N | 0.500517477 | None | None | N |
H/S | 0.445 | ambiguous | 0.411 | ambiguous | -2.113 | Highly Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
H/T | 0.3423 | ambiguous | 0.3055 | benign | -1.785 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
H/V | 0.1638 | likely_benign | 0.1359 | benign | -1.209 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
H/W | 0.5098 | ambiguous | 0.4954 | ambiguous | 0.652 | Stabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
H/Y | 0.1008 | likely_benign | 0.097 | benign | 0.331 | Stabilizing | 0.997 | D | 0.629 | neutral | N | 0.501730986 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.