Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22273 | 67042;67043;67044 | chr2:178580562;178580561;178580560 | chr2:179445289;179445288;179445287 |
N2AB | 20632 | 62119;62120;62121 | chr2:178580562;178580561;178580560 | chr2:179445289;179445288;179445287 |
N2A | 19705 | 59338;59339;59340 | chr2:178580562;178580561;178580560 | chr2:179445289;179445288;179445287 |
N2B | 13208 | 39847;39848;39849 | chr2:178580562;178580561;178580560 | chr2:179445289;179445288;179445287 |
Novex-1 | 13333 | 40222;40223;40224 | chr2:178580562;178580561;178580560 | chr2:179445289;179445288;179445287 |
Novex-2 | 13400 | 40423;40424;40425 | chr2:178580562;178580561;178580560 | chr2:179445289;179445288;179445287 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.698 | N | 0.463 | 0.073 | 0.514072065251 | gnomAD-4.0.0 | 1.5946E-06 | None | None | None | None | I | None | 5.67344E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8617 | likely_pathogenic | 0.8405 | pathogenic | -1.981 | Destabilizing | 0.754 | D | 0.473 | neutral | None | None | None | None | I |
L/C | 0.8372 | likely_pathogenic | 0.8171 | pathogenic | -1.192 | Destabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | I |
L/D | 0.996 | likely_pathogenic | 0.9944 | pathogenic | -1.678 | Destabilizing | 0.993 | D | 0.673 | neutral | None | None | None | None | I |
L/E | 0.9676 | likely_pathogenic | 0.9594 | pathogenic | -1.527 | Destabilizing | 0.978 | D | 0.673 | neutral | None | None | None | None | I |
L/F | 0.7035 | likely_pathogenic | 0.6353 | pathogenic | -1.091 | Destabilizing | 0.032 | N | 0.377 | neutral | N | 0.502622177 | None | None | I |
L/G | 0.975 | likely_pathogenic | 0.9719 | pathogenic | -2.445 | Highly Destabilizing | 0.978 | D | 0.683 | prob.neutral | None | None | None | None | I |
L/H | 0.9346 | likely_pathogenic | 0.9149 | pathogenic | -1.673 | Destabilizing | 0.998 | D | 0.641 | neutral | None | None | None | None | I |
L/I | 0.1912 | likely_benign | 0.1624 | benign | -0.696 | Destabilizing | 0.698 | D | 0.463 | neutral | N | 0.468333275 | None | None | I |
L/K | 0.9322 | likely_pathogenic | 0.9209 | pathogenic | -1.537 | Destabilizing | 0.978 | D | 0.625 | neutral | None | None | None | None | I |
L/M | 0.343 | ambiguous | 0.304 | benign | -0.559 | Destabilizing | 0.978 | D | 0.575 | neutral | None | None | None | None | I |
L/N | 0.9705 | likely_pathogenic | 0.9613 | pathogenic | -1.671 | Destabilizing | 0.993 | D | 0.668 | neutral | None | None | None | None | I |
L/P | 0.9914 | likely_pathogenic | 0.9878 | pathogenic | -1.099 | Destabilizing | 0.993 | D | 0.671 | neutral | None | None | None | None | I |
L/Q | 0.8605 | likely_pathogenic | 0.8345 | pathogenic | -1.629 | Destabilizing | 0.993 | D | 0.621 | neutral | None | None | None | None | I |
L/R | 0.8982 | likely_pathogenic | 0.8795 | pathogenic | -1.129 | Destabilizing | 0.978 | D | 0.621 | neutral | None | None | None | None | I |
L/S | 0.9531 | likely_pathogenic | 0.9407 | pathogenic | -2.369 | Highly Destabilizing | 0.971 | D | 0.625 | neutral | N | 0.502622177 | None | None | I |
L/T | 0.8586 | likely_pathogenic | 0.8313 | pathogenic | -2.084 | Highly Destabilizing | 0.956 | D | 0.583 | neutral | None | None | None | None | I |
L/V | 0.2284 | likely_benign | 0.1963 | benign | -1.099 | Destabilizing | 0.014 | N | 0.351 | neutral | N | 0.385346532 | None | None | I |
L/W | 0.9394 | likely_pathogenic | 0.9149 | pathogenic | -1.365 | Destabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | I |
L/Y | 0.9319 | likely_pathogenic | 0.9072 | pathogenic | -1.068 | Destabilizing | 0.915 | D | 0.593 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.