Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22289 | 67090;67091;67092 | chr2:178580514;178580513;178580512 | chr2:179445241;179445240;179445239 |
N2AB | 20648 | 62167;62168;62169 | chr2:178580514;178580513;178580512 | chr2:179445241;179445240;179445239 |
N2A | 19721 | 59386;59387;59388 | chr2:178580514;178580513;178580512 | chr2:179445241;179445240;179445239 |
N2B | 13224 | 39895;39896;39897 | chr2:178580514;178580513;178580512 | chr2:179445241;179445240;179445239 |
Novex-1 | 13349 | 40270;40271;40272 | chr2:178580514;178580513;178580512 | chr2:179445241;179445240;179445239 |
Novex-2 | 13416 | 40471;40472;40473 | chr2:178580514;178580513;178580512 | chr2:179445241;179445240;179445239 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs751203353 | -0.187 | 1.0 | D | 0.722 | 0.72 | 0.773713791686 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
P/L | rs751203353 | -0.187 | 1.0 | D | 0.722 | 0.72 | 0.773713791686 | gnomAD-4.0.0 | 1.59339E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43357E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9511 | likely_pathogenic | 0.9501 | pathogenic | -0.515 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | D | 0.565076741 | None | None | I |
P/C | 0.9939 | likely_pathogenic | 0.9943 | pathogenic | -0.442 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
P/D | 0.9888 | likely_pathogenic | 0.9868 | pathogenic | -0.457 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
P/E | 0.9879 | likely_pathogenic | 0.9863 | pathogenic | -0.585 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
P/F | 0.9963 | likely_pathogenic | 0.9959 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
P/G | 0.987 | likely_pathogenic | 0.9857 | pathogenic | -0.642 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
P/H | 0.9807 | likely_pathogenic | 0.98 | pathogenic | -0.311 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
P/I | 0.9684 | likely_pathogenic | 0.9692 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
P/K | 0.9839 | likely_pathogenic | 0.9827 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
P/L | 0.9235 | likely_pathogenic | 0.9225 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | D | 0.625940475 | None | None | I |
P/M | 0.9787 | likely_pathogenic | 0.9802 | pathogenic | -0.261 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
P/N | 0.9842 | likely_pathogenic | 0.9822 | pathogenic | -0.071 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
P/Q | 0.9799 | likely_pathogenic | 0.9788 | pathogenic | -0.357 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | D | 0.565076741 | None | None | I |
P/R | 0.9758 | likely_pathogenic | 0.9753 | pathogenic | 0.097 | Stabilizing | 1.0 | D | 0.743 | deleterious | D | 0.625536867 | None | None | I |
P/S | 0.9794 | likely_pathogenic | 0.9786 | pathogenic | -0.389 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | D | 0.564569762 | None | None | I |
P/T | 0.9516 | likely_pathogenic | 0.9528 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | D | 0.625536867 | None | None | I |
P/V | 0.9554 | likely_pathogenic | 0.9556 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
P/W | 0.999 | likely_pathogenic | 0.999 | pathogenic | -0.921 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
P/Y | 0.9949 | likely_pathogenic | 0.9948 | pathogenic | -0.618 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.