Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22292 | 67099;67100;67101 | chr2:178580505;178580504;178580503 | chr2:179445232;179445231;179445230 |
N2AB | 20651 | 62176;62177;62178 | chr2:178580505;178580504;178580503 | chr2:179445232;179445231;179445230 |
N2A | 19724 | 59395;59396;59397 | chr2:178580505;178580504;178580503 | chr2:179445232;179445231;179445230 |
N2B | 13227 | 39904;39905;39906 | chr2:178580505;178580504;178580503 | chr2:179445232;179445231;179445230 |
Novex-1 | 13352 | 40279;40280;40281 | chr2:178580505;178580504;178580503 | chr2:179445232;179445231;179445230 |
Novex-2 | 13419 | 40480;40481;40482 | chr2:178580505;178580504;178580503 | chr2:179445232;179445231;179445230 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 1.0 | N | 0.699 | 0.506 | 0.419335720491 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3524 | ambiguous | 0.3065 | benign | -0.063 | Destabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | I |
K/C | 0.6513 | likely_pathogenic | 0.6109 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
K/D | 0.6376 | likely_pathogenic | 0.5752 | pathogenic | 0.001 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
K/E | 0.2273 | likely_benign | 0.1869 | benign | 0.046 | Stabilizing | 0.999 | D | 0.601 | neutral | N | 0.462850097 | None | None | I |
K/F | 0.8225 | likely_pathogenic | 0.762 | pathogenic | -0.017 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
K/G | 0.5954 | likely_pathogenic | 0.5321 | ambiguous | -0.336 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | I |
K/H | 0.2959 | likely_benign | 0.2649 | benign | -0.638 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | I |
K/I | 0.319 | likely_benign | 0.2665 | benign | 0.597 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
K/L | 0.3861 | ambiguous | 0.3447 | ambiguous | 0.597 | Stabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | I |
K/M | 0.2688 | likely_benign | 0.2278 | benign | 0.283 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.492773582 | None | None | I |
K/N | 0.4135 | ambiguous | 0.4058 | ambiguous | 0.017 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | N | 0.50631566 | None | None | I |
K/P | 0.954 | likely_pathogenic | 0.9377 | pathogenic | 0.407 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
K/Q | 0.1416 | likely_benign | 0.122 | benign | -0.096 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.507161022 | None | None | I |
K/R | 0.0837 | likely_benign | 0.0804 | benign | -0.269 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.495906665 | None | None | I |
K/S | 0.4086 | ambiguous | 0.3665 | ambiguous | -0.47 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | I |
K/T | 0.1617 | likely_benign | 0.141 | benign | -0.257 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.467199911 | None | None | I |
K/V | 0.2561 | likely_benign | 0.2171 | benign | 0.407 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
K/W | 0.8457 | likely_pathogenic | 0.7986 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
K/Y | 0.6843 | likely_pathogenic | 0.6266 | pathogenic | 0.312 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.