Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22293 | 67102;67103;67104 | chr2:178580502;178580501;178580500 | chr2:179445229;179445228;179445227 |
N2AB | 20652 | 62179;62180;62181 | chr2:178580502;178580501;178580500 | chr2:179445229;179445228;179445227 |
N2A | 19725 | 59398;59399;59400 | chr2:178580502;178580501;178580500 | chr2:179445229;179445228;179445227 |
N2B | 13228 | 39907;39908;39909 | chr2:178580502;178580501;178580500 | chr2:179445229;179445228;179445227 |
Novex-1 | 13353 | 40282;40283;40284 | chr2:178580502;178580501;178580500 | chr2:179445229;179445228;179445227 |
Novex-2 | 13420 | 40483;40484;40485 | chr2:178580502;178580501;178580500 | chr2:179445229;179445228;179445227 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs766138542 | -2.001 | 0.92 | N | 0.633 | 0.621 | 0.745045780685 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
I/T | rs766138542 | -2.001 | 0.92 | N | 0.633 | 0.621 | 0.745045780685 | gnomAD-4.0.0 | 1.59312E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78489E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8167 | likely_pathogenic | 0.7907 | pathogenic | -2.212 | Highly Destabilizing | 0.079 | N | 0.395 | neutral | None | None | None | None | I |
I/C | 0.8427 | likely_pathogenic | 0.8186 | pathogenic | -1.607 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | I |
I/D | 0.9943 | likely_pathogenic | 0.9913 | pathogenic | -1.752 | Destabilizing | 0.991 | D | 0.788 | deleterious | None | None | None | None | I |
I/E | 0.9766 | likely_pathogenic | 0.968 | pathogenic | -1.634 | Destabilizing | 0.991 | D | 0.783 | deleterious | None | None | None | None | I |
I/F | 0.5953 | likely_pathogenic | 0.5452 | ambiguous | -1.398 | Destabilizing | 0.988 | D | 0.597 | neutral | N | 0.50083234 | None | None | I |
I/G | 0.971 | likely_pathogenic | 0.9603 | pathogenic | -2.675 | Highly Destabilizing | 0.884 | D | 0.763 | deleterious | None | None | None | None | I |
I/H | 0.972 | likely_pathogenic | 0.963 | pathogenic | -1.997 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | I |
I/K | 0.9378 | likely_pathogenic | 0.9216 | pathogenic | -1.612 | Destabilizing | 0.982 | D | 0.783 | deleterious | None | None | None | None | I |
I/L | 0.3184 | likely_benign | 0.2915 | benign | -0.938 | Destabilizing | 0.509 | D | 0.395 | neutral | N | 0.497336393 | None | None | I |
I/M | 0.214 | likely_benign | 0.1971 | benign | -0.85 | Destabilizing | 0.988 | D | 0.569 | neutral | N | 0.517975544 | None | None | I |
I/N | 0.8889 | likely_pathogenic | 0.8638 | pathogenic | -1.608 | Destabilizing | 0.996 | D | 0.805 | deleterious | D | 0.536586778 | None | None | I |
I/P | 0.9628 | likely_pathogenic | 0.9471 | pathogenic | -1.336 | Destabilizing | 0.991 | D | 0.793 | deleterious | None | None | None | None | I |
I/Q | 0.937 | likely_pathogenic | 0.922 | pathogenic | -1.619 | Destabilizing | 0.997 | D | 0.807 | deleterious | None | None | None | None | I |
I/R | 0.926 | likely_pathogenic | 0.901 | pathogenic | -1.206 | Destabilizing | 0.991 | D | 0.804 | deleterious | None | None | None | None | I |
I/S | 0.879 | likely_pathogenic | 0.8601 | pathogenic | -2.365 | Highly Destabilizing | 0.852 | D | 0.726 | prob.delet. | D | 0.524976983 | None | None | I |
I/T | 0.8195 | likely_pathogenic | 0.8102 | pathogenic | -2.105 | Highly Destabilizing | 0.92 | D | 0.633 | neutral | N | 0.506619238 | None | None | I |
I/V | 0.1226 | likely_benign | 0.1121 | benign | -1.336 | Destabilizing | 0.061 | N | 0.196 | neutral | N | 0.427249083 | None | None | I |
I/W | 0.9823 | likely_pathogenic | 0.9735 | pathogenic | -1.595 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | I |
I/Y | 0.8963 | likely_pathogenic | 0.8779 | pathogenic | -1.349 | Destabilizing | 0.997 | D | 0.685 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.