Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2230 | 6913;6914;6915 | chr2:178775023;178775022;178775021 | chr2:179639750;179639749;179639748 |
N2AB | 2230 | 6913;6914;6915 | chr2:178775023;178775022;178775021 | chr2:179639750;179639749;179639748 |
N2A | 2230 | 6913;6914;6915 | chr2:178775023;178775022;178775021 | chr2:179639750;179639749;179639748 |
N2B | 2184 | 6775;6776;6777 | chr2:178775023;178775022;178775021 | chr2:179639750;179639749;179639748 |
Novex-1 | 2184 | 6775;6776;6777 | chr2:178775023;178775022;178775021 | chr2:179639750;179639749;179639748 |
Novex-2 | 2184 | 6775;6776;6777 | chr2:178775023;178775022;178775021 | chr2:179639750;179639749;179639748 |
Novex-3 | 2230 | 6913;6914;6915 | chr2:178775023;178775022;178775021 | chr2:179639750;179639749;179639748 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | None | None | 0.997 | N | 0.732 | 0.536 | 0.781051952282 | gnomAD-4.0.0 | 6.84128E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99336E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9504 | likely_pathogenic | 0.959 | pathogenic | -2.665 | Highly Destabilizing | 0.86 | D | 0.625 | neutral | None | None | None | None | N |
F/C | 0.8051 | likely_pathogenic | 0.8419 | pathogenic | -1.347 | Destabilizing | 0.997 | D | 0.732 | prob.delet. | N | 0.510755985 | None | None | N |
F/D | 0.9903 | likely_pathogenic | 0.9922 | pathogenic | -2.488 | Highly Destabilizing | 0.993 | D | 0.767 | deleterious | None | None | None | None | N |
F/E | 0.9861 | likely_pathogenic | 0.9888 | pathogenic | -2.394 | Highly Destabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | N |
F/G | 0.9822 | likely_pathogenic | 0.9855 | pathogenic | -3.011 | Highly Destabilizing | 0.978 | D | 0.703 | prob.neutral | None | None | None | None | N |
F/H | 0.8235 | likely_pathogenic | 0.84 | pathogenic | -1.392 | Destabilizing | 0.956 | D | 0.702 | prob.neutral | None | None | None | None | N |
F/I | 0.657 | likely_pathogenic | 0.6979 | pathogenic | -1.577 | Destabilizing | 0.698 | D | 0.559 | neutral | N | 0.477229867 | None | None | N |
F/K | 0.9754 | likely_pathogenic | 0.9784 | pathogenic | -1.376 | Destabilizing | 0.978 | D | 0.748 | deleterious | None | None | None | None | N |
F/L | 0.9667 | likely_pathogenic | 0.9725 | pathogenic | -1.577 | Destabilizing | 0.489 | N | 0.591 | neutral | N | 0.508601651 | None | None | N |
F/M | 0.8578 | likely_pathogenic | 0.8734 | pathogenic | -1.19 | Destabilizing | 0.559 | D | 0.461 | neutral | None | None | None | None | N |
F/N | 0.9409 | likely_pathogenic | 0.9525 | pathogenic | -1.482 | Destabilizing | 0.978 | D | 0.769 | deleterious | None | None | None | None | N |
F/P | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -1.941 | Destabilizing | 0.993 | D | 0.773 | deleterious | None | None | None | None | N |
F/Q | 0.954 | likely_pathogenic | 0.9601 | pathogenic | -1.654 | Destabilizing | 0.978 | D | 0.769 | deleterious | None | None | None | None | N |
F/R | 0.9331 | likely_pathogenic | 0.94 | pathogenic | -0.648 | Destabilizing | 0.978 | D | 0.771 | deleterious | None | None | None | None | N |
F/S | 0.8857 | likely_pathogenic | 0.9099 | pathogenic | -2.151 | Highly Destabilizing | 0.97 | D | 0.678 | prob.neutral | N | 0.471083069 | None | None | N |
F/T | 0.9189 | likely_pathogenic | 0.9329 | pathogenic | -1.966 | Destabilizing | 0.978 | D | 0.679 | prob.neutral | None | None | None | None | N |
F/V | 0.6668 | likely_pathogenic | 0.7129 | pathogenic | -1.941 | Destabilizing | 0.698 | D | 0.576 | neutral | N | 0.504987561 | None | None | N |
F/W | 0.8625 | likely_pathogenic | 0.8722 | pathogenic | -0.688 | Destabilizing | 0.994 | D | 0.621 | neutral | None | None | None | None | N |
F/Y | 0.2825 | likely_benign | 0.3004 | benign | -0.925 | Destabilizing | 0.014 | N | 0.429 | neutral | N | 0.505370739 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.