Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22304 | 67135;67136;67137 | chr2:178580469;178580468;178580467 | chr2:179445196;179445195;179445194 |
N2AB | 20663 | 62212;62213;62214 | chr2:178580469;178580468;178580467 | chr2:179445196;179445195;179445194 |
N2A | 19736 | 59431;59432;59433 | chr2:178580469;178580468;178580467 | chr2:179445196;179445195;179445194 |
N2B | 13239 | 39940;39941;39942 | chr2:178580469;178580468;178580467 | chr2:179445196;179445195;179445194 |
Novex-1 | 13364 | 40315;40316;40317 | chr2:178580469;178580468;178580467 | chr2:179445196;179445195;179445194 |
Novex-2 | 13431 | 40516;40517;40518 | chr2:178580469;178580468;178580467 | chr2:179445196;179445195;179445194 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.334 | N | 0.421 | 0.198 | 0.292062946507 | gnomAD-4.0.0 | 1.59281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86076E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.287 | likely_benign | 0.273 | benign | -0.033 | Destabilizing | 0.201 | N | 0.476 | neutral | N | 0.47585668 | None | None | N |
D/C | 0.7576 | likely_pathogenic | 0.757 | pathogenic | 0.001 | Stabilizing | 0.982 | D | 0.674 | neutral | None | None | None | None | N |
D/E | 0.1067 | likely_benign | 0.1048 | benign | -0.209 | Destabilizing | 0.001 | N | 0.257 | neutral | N | 0.411805202 | None | None | N |
D/F | 0.7961 | likely_pathogenic | 0.7923 | pathogenic | -0.107 | Destabilizing | 0.935 | D | 0.687 | prob.neutral | None | None | None | None | N |
D/G | 0.2307 | likely_benign | 0.2196 | benign | -0.166 | Destabilizing | 0.334 | N | 0.439 | neutral | N | 0.487132466 | None | None | N |
D/H | 0.4484 | ambiguous | 0.415 | ambiguous | 0.336 | Stabilizing | 0.931 | D | 0.551 | neutral | N | 0.519263528 | None | None | N |
D/I | 0.6099 | likely_pathogenic | 0.6024 | pathogenic | 0.252 | Stabilizing | 0.826 | D | 0.697 | prob.neutral | None | None | None | None | N |
D/K | 0.4613 | ambiguous | 0.4471 | ambiguous | 0.457 | Stabilizing | 0.25 | N | 0.407 | neutral | None | None | None | None | N |
D/L | 0.5226 | ambiguous | 0.5315 | ambiguous | 0.252 | Stabilizing | 0.7 | D | 0.687 | prob.neutral | None | None | None | None | N |
D/M | 0.7209 | likely_pathogenic | 0.7162 | pathogenic | 0.168 | Stabilizing | 0.982 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/N | 0.1454 | likely_benign | 0.1422 | benign | 0.235 | Stabilizing | 0.334 | N | 0.421 | neutral | N | 0.439301234 | None | None | N |
D/P | 0.8039 | likely_pathogenic | 0.7733 | pathogenic | 0.177 | Stabilizing | 0.826 | D | 0.529 | neutral | None | None | None | None | N |
D/Q | 0.3574 | ambiguous | 0.3438 | ambiguous | 0.248 | Stabilizing | 0.539 | D | 0.417 | neutral | None | None | None | None | N |
D/R | 0.5792 | likely_pathogenic | 0.5552 | ambiguous | 0.634 | Stabilizing | 0.539 | D | 0.627 | neutral | None | None | None | None | N |
D/S | 0.1916 | likely_benign | 0.1827 | benign | 0.135 | Stabilizing | 0.25 | N | 0.387 | neutral | None | None | None | None | N |
D/T | 0.3555 | ambiguous | 0.34 | ambiguous | 0.242 | Stabilizing | 0.7 | D | 0.439 | neutral | None | None | None | None | N |
D/V | 0.3986 | ambiguous | 0.3853 | ambiguous | 0.177 | Stabilizing | 0.638 | D | 0.679 | prob.neutral | N | 0.481571931 | None | None | N |
D/W | 0.9112 | likely_pathogenic | 0.8981 | pathogenic | -0.055 | Destabilizing | 0.982 | D | 0.674 | neutral | None | None | None | None | N |
D/Y | 0.4017 | ambiguous | 0.3915 | ambiguous | 0.117 | Stabilizing | 0.916 | D | 0.687 | prob.neutral | N | 0.483833132 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.