Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22308 | 67147;67148;67149 | chr2:178580457;178580456;178580455 | chr2:179445184;179445183;179445182 |
N2AB | 20667 | 62224;62225;62226 | chr2:178580457;178580456;178580455 | chr2:179445184;179445183;179445182 |
N2A | 19740 | 59443;59444;59445 | chr2:178580457;178580456;178580455 | chr2:179445184;179445183;179445182 |
N2B | 13243 | 39952;39953;39954 | chr2:178580457;178580456;178580455 | chr2:179445184;179445183;179445182 |
Novex-1 | 13368 | 40327;40328;40329 | chr2:178580457;178580456;178580455 | chr2:179445184;179445183;179445182 |
Novex-2 | 13435 | 40528;40529;40530 | chr2:178580457;178580456;178580455 | chr2:179445184;179445183;179445182 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.825 | 0.725 | 0.718142918398 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6115 | likely_pathogenic | 0.6329 | pathogenic | -2.23 | Highly Destabilizing | 0.997 | D | 0.537 | neutral | None | None | None | None | N |
L/C | 0.7108 | likely_pathogenic | 0.702 | pathogenic | -1.643 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
L/D | 0.9651 | likely_pathogenic | 0.9638 | pathogenic | -1.9 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
L/E | 0.876 | likely_pathogenic | 0.8693 | pathogenic | -1.824 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/F | 0.3026 | likely_benign | 0.2957 | benign | -1.549 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
L/G | 0.8794 | likely_pathogenic | 0.8822 | pathogenic | -2.647 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/H | 0.7739 | likely_pathogenic | 0.7644 | pathogenic | -1.921 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/I | 0.1161 | likely_benign | 0.115 | benign | -1.104 | Destabilizing | 0.994 | D | 0.497 | neutral | None | None | None | None | N |
L/K | 0.8235 | likely_pathogenic | 0.8112 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
L/M | 0.1653 | likely_benign | 0.1657 | benign | -0.952 | Destabilizing | 0.999 | D | 0.753 | deleterious | N | 0.501891275 | None | None | N |
L/N | 0.8245 | likely_pathogenic | 0.8218 | pathogenic | -1.623 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
L/P | 0.8894 | likely_pathogenic | 0.8877 | pathogenic | -1.451 | Destabilizing | 1.0 | D | 0.825 | deleterious | N | 0.490153463 | None | None | N |
L/Q | 0.6808 | likely_pathogenic | 0.6732 | pathogenic | -1.721 | Destabilizing | 1.0 | D | 0.814 | deleterious | N | 0.50241135 | None | None | N |
L/R | 0.7826 | likely_pathogenic | 0.7646 | pathogenic | -1.13 | Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.502237992 | None | None | N |
L/S | 0.7867 | likely_pathogenic | 0.7994 | pathogenic | -2.323 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
L/T | 0.5085 | ambiguous | 0.5248 | ambiguous | -2.115 | Highly Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/V | 0.1429 | likely_benign | 0.1392 | benign | -1.451 | Destabilizing | 0.767 | D | 0.374 | neutral | N | 0.440840029 | None | None | N |
L/W | 0.6391 | likely_pathogenic | 0.6098 | pathogenic | -1.698 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
L/Y | 0.6902 | likely_pathogenic | 0.669 | pathogenic | -1.471 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.