Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22309 | 67150;67151;67152 | chr2:178580454;178580453;178580452 | chr2:179445181;179445180;179445179 |
N2AB | 20668 | 62227;62228;62229 | chr2:178580454;178580453;178580452 | chr2:179445181;179445180;179445179 |
N2A | 19741 | 59446;59447;59448 | chr2:178580454;178580453;178580452 | chr2:179445181;179445180;179445179 |
N2B | 13244 | 39955;39956;39957 | chr2:178580454;178580453;178580452 | chr2:179445181;179445180;179445179 |
Novex-1 | 13369 | 40330;40331;40332 | chr2:178580454;178580453;178580452 | chr2:179445181;179445180;179445179 |
Novex-2 | 13436 | 40531;40532;40533 | chr2:178580454;178580453;178580452 | chr2:179445181;179445180;179445179 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.09 | N | 0.405 | 0.196 | 0.301789629655 | gnomAD-4.0.0 | 6.84466E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99701E-07 | 0 | 0 |
D/G | rs1481781346 | None | 0.324 | N | 0.317 | 0.194 | 0.288352970974 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs1481781346 | None | 0.324 | N | 0.317 | 0.194 | 0.288352970974 | gnomAD-4.0.0 | 6.5754E-06 | None | None | None | None | N | None | 2.4122E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/H | rs1204440058 | -0.812 | 0.928 | N | 0.375 | 0.208 | 0.347879110917 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66389E-04 |
D/H | rs1204440058 | -0.812 | 0.928 | N | 0.375 | 0.208 | 0.347879110917 | gnomAD-4.0.0 | 2.05342E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99705E-07 | 1.15961E-05 | 1.65772E-05 |
D/N | rs1204440058 | None | 0.324 | N | 0.365 | 0.165 | 0.254244900254 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs1204440058 | None | 0.324 | N | 0.365 | 0.165 | 0.254244900254 | gnomAD-4.0.0 | 2.47987E-06 | None | None | None | None | N | None | 4.0078E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47859E-07 | 0 | 0 |
D/V | rs1481781346 | None | 0.193 | N | 0.431 | 0.255 | 0.306695030598 | gnomAD-4.0.0 | 4.10679E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39821E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2725 | likely_benign | 0.287 | benign | 0.022 | Stabilizing | 0.09 | N | 0.405 | neutral | N | 0.470104144 | None | None | N |
D/C | 0.7383 | likely_pathogenic | 0.7565 | pathogenic | -0.006 | Destabilizing | 0.981 | D | 0.469 | neutral | None | None | None | None | N |
D/E | 0.1603 | likely_benign | 0.1747 | benign | -0.349 | Destabilizing | 0.001 | N | 0.224 | neutral | N | 0.40116692 | None | None | N |
D/F | 0.6693 | likely_pathogenic | 0.6803 | pathogenic | 0.755 | Stabilizing | 0.69 | D | 0.461 | neutral | None | None | None | None | N |
D/G | 0.4163 | ambiguous | 0.4408 | ambiguous | -0.365 | Destabilizing | 0.324 | N | 0.317 | neutral | N | 0.500773767 | None | None | N |
D/H | 0.3726 | ambiguous | 0.38 | ambiguous | 0.623 | Stabilizing | 0.928 | D | 0.375 | neutral | N | 0.468181346 | None | None | N |
D/I | 0.3631 | ambiguous | 0.3727 | ambiguous | 1.044 | Stabilizing | 0.241 | N | 0.404 | neutral | None | None | None | None | N |
D/K | 0.5888 | likely_pathogenic | 0.595 | pathogenic | 0.145 | Stabilizing | 0.241 | N | 0.319 | neutral | None | None | None | None | N |
D/L | 0.4311 | ambiguous | 0.4348 | ambiguous | 1.044 | Stabilizing | 0.001 | N | 0.296 | neutral | None | None | None | None | N |
D/M | 0.6329 | likely_pathogenic | 0.6394 | pathogenic | 1.178 | Stabilizing | 0.054 | N | 0.392 | neutral | None | None | None | None | N |
D/N | 0.1656 | likely_benign | 0.1752 | benign | -0.571 | Destabilizing | 0.324 | N | 0.365 | neutral | N | 0.425505218 | None | None | N |
D/P | 0.9514 | likely_pathogenic | 0.9529 | pathogenic | 0.731 | Stabilizing | 0.818 | D | 0.346 | neutral | None | None | None | None | N |
D/Q | 0.3937 | ambiguous | 0.404 | ambiguous | -0.354 | Destabilizing | 0.527 | D | 0.343 | neutral | None | None | None | None | N |
D/R | 0.5928 | likely_pathogenic | 0.594 | pathogenic | 0.377 | Stabilizing | 0.69 | D | 0.396 | neutral | None | None | None | None | N |
D/S | 0.1967 | likely_benign | 0.2 | benign | -0.776 | Destabilizing | 0.241 | N | 0.323 | neutral | None | None | None | None | N |
D/T | 0.286 | likely_benign | 0.2896 | benign | -0.437 | Destabilizing | 0.388 | N | 0.324 | neutral | None | None | None | None | N |
D/V | 0.2282 | likely_benign | 0.2335 | benign | 0.731 | Stabilizing | 0.193 | N | 0.431 | neutral | N | 0.4518651 | None | None | N |
D/W | 0.9032 | likely_pathogenic | 0.902 | pathogenic | 0.95 | Stabilizing | 0.981 | D | 0.504 | neutral | None | None | None | None | N |
D/Y | 0.3203 | likely_benign | 0.3298 | benign | 1.038 | Stabilizing | 0.912 | D | 0.473 | neutral | N | 0.468797422 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.