Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2232 | 6919;6920;6921 | chr2:178775017;178775016;178775015 | chr2:179639744;179639743;179639742 |
N2AB | 2232 | 6919;6920;6921 | chr2:178775017;178775016;178775015 | chr2:179639744;179639743;179639742 |
N2A | 2232 | 6919;6920;6921 | chr2:178775017;178775016;178775015 | chr2:179639744;179639743;179639742 |
N2B | 2186 | 6781;6782;6783 | chr2:178775017;178775016;178775015 | chr2:179639744;179639743;179639742 |
Novex-1 | 2186 | 6781;6782;6783 | chr2:178775017;178775016;178775015 | chr2:179639744;179639743;179639742 |
Novex-2 | 2186 | 6781;6782;6783 | chr2:178775017;178775016;178775015 | chr2:179639744;179639743;179639742 |
Novex-3 | 2232 | 6919;6920;6921 | chr2:178775017;178775016;178775015 | chr2:179639744;179639743;179639742 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs377098846 | -0.831 | 1.0 | N | 0.763 | 0.643 | None | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 6.15E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2608 | likely_benign | 0.2581 | benign | -0.662 | Destabilizing | 0.997 | D | 0.498 | neutral | N | 0.50957101 | None | None | N |
S/C | 0.4161 | ambiguous | 0.4087 | ambiguous | -0.526 | Destabilizing | 1.0 | D | 0.774 | deleterious | N | 0.509609052 | None | None | N |
S/D | 0.9368 | likely_pathogenic | 0.9322 | pathogenic | -1.221 | Destabilizing | 0.999 | D | 0.58 | neutral | None | None | None | None | N |
S/E | 0.9478 | likely_pathogenic | 0.9432 | pathogenic | -1.069 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
S/F | 0.8507 | likely_pathogenic | 0.8542 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.508910629 | None | None | N |
S/G | 0.3696 | ambiguous | 0.3665 | ambiguous | -1.053 | Destabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | N |
S/H | 0.8158 | likely_pathogenic | 0.796 | pathogenic | -1.484 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
S/I | 0.7576 | likely_pathogenic | 0.7699 | pathogenic | 0.313 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
S/K | 0.9842 | likely_pathogenic | 0.9826 | pathogenic | -0.596 | Destabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | N |
S/L | 0.487 | ambiguous | 0.5019 | ambiguous | 0.313 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
S/M | 0.6178 | likely_pathogenic | 0.6306 | pathogenic | 0.316 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
S/N | 0.537 | ambiguous | 0.5144 | ambiguous | -1.131 | Destabilizing | 0.999 | D | 0.568 | neutral | None | None | None | None | N |
S/P | 0.9895 | likely_pathogenic | 0.9904 | pathogenic | 0.025 | Stabilizing | 1.0 | D | 0.743 | deleterious | D | 0.572064337 | None | None | N |
S/Q | 0.88 | likely_pathogenic | 0.867 | pathogenic | -0.928 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
S/R | 0.9667 | likely_pathogenic | 0.963 | pathogenic | -0.879 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/T | 0.2577 | likely_benign | 0.2603 | benign | -0.826 | Destabilizing | 0.999 | D | 0.558 | neutral | N | 0.46942681 | None | None | N |
S/V | 0.7053 | likely_pathogenic | 0.7124 | pathogenic | 0.025 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
S/W | 0.869 | likely_pathogenic | 0.8744 | pathogenic | -0.669 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
S/Y | 0.737 | likely_pathogenic | 0.7359 | pathogenic | -0.261 | Destabilizing | 1.0 | D | 0.764 | deleterious | N | 0.511180986 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.