Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22335 | 67228;67229;67230 | chr2:178580376;178580375;178580374 | chr2:179445103;179445102;179445101 |
N2AB | 20694 | 62305;62306;62307 | chr2:178580376;178580375;178580374 | chr2:179445103;179445102;179445101 |
N2A | 19767 | 59524;59525;59526 | chr2:178580376;178580375;178580374 | chr2:179445103;179445102;179445101 |
N2B | 13270 | 40033;40034;40035 | chr2:178580376;178580375;178580374 | chr2:179445103;179445102;179445101 |
Novex-1 | 13395 | 40408;40409;40410 | chr2:178580376;178580375;178580374 | chr2:179445103;179445102;179445101 |
Novex-2 | 13462 | 40609;40610;40611 | chr2:178580376;178580375;178580374 | chr2:179445103;179445102;179445101 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.82 | N | 0.645 | 0.174 | 0.40318662893 | gnomAD-4.0.0 | 1.59251E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86064E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1122 | likely_benign | 0.1098 | benign | -1.09 | Destabilizing | 0.349 | N | 0.509 | neutral | N | 0.488201225 | None | None | I |
T/C | 0.3336 | likely_benign | 0.3295 | benign | -0.956 | Destabilizing | 0.996 | D | 0.639 | neutral | None | None | None | None | I |
T/D | 0.614 | likely_pathogenic | 0.6175 | pathogenic | -1.345 | Destabilizing | 0.633 | D | 0.62 | neutral | None | None | None | None | I |
T/E | 0.3866 | ambiguous | 0.379 | ambiguous | -1.183 | Destabilizing | 0.775 | D | 0.623 | neutral | None | None | None | None | I |
T/F | 0.2492 | likely_benign | 0.2532 | benign | -0.676 | Destabilizing | 0.923 | D | 0.741 | deleterious | None | None | None | None | I |
T/G | 0.3595 | ambiguous | 0.3659 | ambiguous | -1.486 | Destabilizing | 0.633 | D | 0.654 | neutral | None | None | None | None | I |
T/H | 0.2137 | likely_benign | 0.2185 | benign | -1.613 | Destabilizing | 0.989 | D | 0.714 | prob.delet. | None | None | None | None | I |
T/I | 0.1578 | likely_benign | 0.1589 | benign | -0.069 | Destabilizing | 0.82 | D | 0.645 | neutral | N | 0.506758377 | None | None | I |
T/K | 0.2342 | likely_benign | 0.2445 | benign | -0.842 | Destabilizing | 0.633 | D | 0.623 | neutral | None | None | None | None | I |
T/L | 0.1177 | likely_benign | 0.1149 | benign | -0.069 | Destabilizing | 0.633 | D | 0.575 | neutral | None | None | None | None | I |
T/M | 0.1081 | likely_benign | 0.0997 | benign | -0.125 | Destabilizing | 0.415 | N | 0.55 | neutral | None | None | None | None | I |
T/N | 0.162 | likely_benign | 0.1672 | benign | -1.356 | Destabilizing | 0.018 | N | 0.379 | neutral | N | 0.4968881 | None | None | I |
T/P | 0.8367 | likely_pathogenic | 0.8526 | pathogenic | -0.377 | Destabilizing | 0.949 | D | 0.669 | neutral | N | 0.516220208 | None | None | I |
T/Q | 0.2284 | likely_benign | 0.2275 | benign | -1.207 | Destabilizing | 0.923 | D | 0.678 | prob.neutral | None | None | None | None | I |
T/R | 0.2019 | likely_benign | 0.2063 | benign | -0.922 | Destabilizing | 0.923 | D | 0.655 | neutral | None | None | None | None | I |
T/S | 0.1226 | likely_benign | 0.1244 | benign | -1.57 | Destabilizing | 0.034 | N | 0.267 | neutral | D | 0.529037804 | None | None | I |
T/V | 0.1366 | likely_benign | 0.1384 | benign | -0.377 | Destabilizing | 0.633 | D | 0.539 | neutral | None | None | None | None | I |
T/W | 0.6061 | likely_pathogenic | 0.6129 | pathogenic | -0.786 | Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | I |
T/Y | 0.2769 | likely_benign | 0.281 | benign | -0.452 | Destabilizing | 0.987 | D | 0.74 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.