Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2234 | 6925;6926;6927 | chr2:178775011;178775010;178775009 | chr2:179639738;179639737;179639736 |
N2AB | 2234 | 6925;6926;6927 | chr2:178775011;178775010;178775009 | chr2:179639738;179639737;179639736 |
N2A | 2234 | 6925;6926;6927 | chr2:178775011;178775010;178775009 | chr2:179639738;179639737;179639736 |
N2B | 2188 | 6787;6788;6789 | chr2:178775011;178775010;178775009 | chr2:179639738;179639737;179639736 |
Novex-1 | 2188 | 6787;6788;6789 | chr2:178775011;178775010;178775009 | chr2:179639738;179639737;179639736 |
Novex-2 | 2188 | 6787;6788;6789 | chr2:178775011;178775010;178775009 | chr2:179639738;179639737;179639736 |
Novex-3 | 2234 | 6925;6926;6927 | chr2:178775011;178775010;178775009 | chr2:179639738;179639737;179639736 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs766750289 | -1.237 | 0.999 | N | 0.711 | 0.194 | 0.625654597223 | gnomAD-2.1.1 | 1.59E-05 | None | None | None | None | N | None | 0 | 0 | None | 3.97141E-04 | 0 | None | 0 | None | 0 | 0 | 0 |
L/M | rs766750289 | -1.237 | 0.999 | N | 0.711 | 0.194 | 0.625654597223 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 5.76369E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/M | rs766750289 | -1.237 | 0.999 | N | 0.711 | 0.194 | 0.625654597223 | gnomAD-4.0.0 | 4.33727E-06 | None | None | None | None | N | None | 1.33461E-05 | 0 | None | 1.6893E-04 | 0 | None | 0 | 0 | 8.47485E-07 | 0 | 0 |
L/P | rs534604830 | -1.48 | 0.999 | N | 0.805 | 0.613 | 0.838109445121 | gnomAD-2.1.1 | 7.96E-06 | None | None | None | None | N | None | 0 | 2.89E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.81E-06 | 0 |
L/P | rs534604830 | -1.48 | 0.999 | N | 0.805 | 0.613 | 0.838109445121 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/P | rs534604830 | -1.48 | 0.999 | N | 0.805 | 0.613 | 0.838109445121 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 1E-03 | None | None | None | 0 | None |
L/P | rs534604830 | -1.48 | 0.999 | N | 0.805 | 0.613 | 0.838109445121 | gnomAD-4.0.0 | 2.56096E-06 | None | None | None | None | N | None | 0 | 1.694E-05 | None | 0 | 0 | None | 0 | 0 | 2.39202E-06 | 0 | 0 |
L/Q | None | None | 0.993 | N | 0.809 | 0.451 | 0.833376837834 | gnomAD-4.0.0 | 1.59084E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4991 | ambiguous | 0.5218 | ambiguous | -1.986 | Destabilizing | 0.983 | D | 0.559 | neutral | None | None | None | None | N |
L/C | 0.7638 | likely_pathogenic | 0.7705 | pathogenic | -1.347 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
L/D | 0.8983 | likely_pathogenic | 0.9056 | pathogenic | -1.408 | Destabilizing | 0.995 | D | 0.807 | deleterious | None | None | None | None | N |
L/E | 0.6597 | likely_pathogenic | 0.6785 | pathogenic | -1.348 | Destabilizing | 0.995 | D | 0.793 | deleterious | None | None | None | None | N |
L/F | 0.2256 | likely_benign | 0.2471 | benign | -1.345 | Destabilizing | 0.998 | D | 0.73 | prob.delet. | None | None | None | None | N |
L/G | 0.7511 | likely_pathogenic | 0.7659 | pathogenic | -2.373 | Highly Destabilizing | 0.995 | D | 0.792 | deleterious | None | None | None | None | N |
L/H | 0.4321 | ambiguous | 0.4496 | ambiguous | -1.573 | Destabilizing | 0.483 | N | 0.505 | neutral | None | None | None | None | N |
L/I | 0.1509 | likely_benign | 0.1596 | benign | -0.961 | Destabilizing | 0.991 | D | 0.472 | neutral | None | None | None | None | N |
L/K | 0.4699 | ambiguous | 0.4863 | ambiguous | -1.267 | Destabilizing | 0.995 | D | 0.787 | deleterious | None | None | None | None | N |
L/M | 0.1556 | likely_benign | 0.1672 | benign | -0.808 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | N | 0.509555358 | None | None | N |
L/N | 0.5806 | likely_pathogenic | 0.6032 | pathogenic | -1.17 | Destabilizing | 0.995 | D | 0.805 | deleterious | None | None | None | None | N |
L/P | 0.7984 | likely_pathogenic | 0.8209 | pathogenic | -1.274 | Destabilizing | 0.999 | D | 0.805 | deleterious | N | 0.510625754 | None | None | N |
L/Q | 0.2994 | likely_benign | 0.3152 | benign | -1.295 | Destabilizing | 0.993 | D | 0.809 | deleterious | N | 0.504454236 | None | None | N |
L/R | 0.3747 | ambiguous | 0.3885 | ambiguous | -0.762 | Destabilizing | 0.993 | D | 0.803 | deleterious | N | 0.472341843 | None | None | N |
L/S | 0.5129 | ambiguous | 0.5335 | ambiguous | -1.909 | Destabilizing | 0.995 | D | 0.778 | deleterious | None | None | None | None | N |
L/T | 0.4012 | ambiguous | 0.4155 | ambiguous | -1.725 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
L/V | 0.168 | likely_benign | 0.1775 | benign | -1.274 | Destabilizing | 0.989 | D | 0.433 | neutral | N | 0.505958288 | None | None | N |
L/W | 0.4908 | ambiguous | 0.5375 | ambiguous | -1.452 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
L/Y | 0.5625 | ambiguous | 0.5994 | pathogenic | -1.215 | Destabilizing | 0.995 | D | 0.808 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.