Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22365 | 67318;67319;67320 | chr2:178580194;178580193;178580192 | chr2:179444921;179444920;179444919 |
N2AB | 20724 | 62395;62396;62397 | chr2:178580194;178580193;178580192 | chr2:179444921;179444920;179444919 |
N2A | 19797 | 59614;59615;59616 | chr2:178580194;178580193;178580192 | chr2:179444921;179444920;179444919 |
N2B | 13300 | 40123;40124;40125 | chr2:178580194;178580193;178580192 | chr2:179444921;179444920;179444919 |
Novex-1 | 13425 | 40498;40499;40500 | chr2:178580194;178580193;178580192 | chr2:179444921;179444920;179444919 |
Novex-2 | 13492 | 40699;40700;40701 | chr2:178580194;178580193;178580192 | chr2:179444921;179444920;179444919 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1449941116 | -0.903 | 0.581 | N | 0.571 | 0.366 | 0.458554320643 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4023 | ambiguous | 0.2713 | benign | -0.581 | Destabilizing | 0.581 | D | 0.571 | neutral | N | 0.470723675 | None | None | N |
E/C | 0.9499 | likely_pathogenic | 0.9019 | pathogenic | -0.357 | Destabilizing | 0.993 | D | 0.694 | prob.neutral | None | None | None | None | N |
E/D | 0.1057 | likely_benign | 0.0926 | benign | -0.531 | Destabilizing | 0.004 | N | 0.172 | neutral | N | 0.43043853 | None | None | N |
E/F | 0.9378 | likely_pathogenic | 0.8675 | pathogenic | 0.053 | Stabilizing | 0.993 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/G | 0.322 | likely_benign | 0.228 | benign | -0.863 | Destabilizing | 0.83 | D | 0.631 | neutral | N | 0.483334201 | None | None | N |
E/H | 0.7944 | likely_pathogenic | 0.6491 | pathogenic | 0.335 | Stabilizing | 0.98 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/I | 0.807 | likely_pathogenic | 0.6446 | pathogenic | 0.166 | Stabilizing | 0.929 | D | 0.744 | deleterious | None | None | None | None | N |
E/K | 0.5937 | likely_pathogenic | 0.4086 | ambiguous | 0.203 | Stabilizing | 0.581 | D | 0.496 | neutral | N | 0.484348159 | None | None | N |
E/L | 0.814 | likely_pathogenic | 0.6581 | pathogenic | 0.166 | Stabilizing | 0.866 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/M | 0.8089 | likely_pathogenic | 0.6606 | pathogenic | 0.222 | Stabilizing | 0.993 | D | 0.653 | neutral | None | None | None | None | N |
E/N | 0.3847 | ambiguous | 0.2577 | benign | -0.547 | Destabilizing | 0.764 | D | 0.656 | neutral | None | None | None | None | N |
E/P | 0.9691 | likely_pathogenic | 0.9001 | pathogenic | -0.062 | Destabilizing | 0.929 | D | 0.748 | deleterious | None | None | None | None | N |
E/Q | 0.3924 | ambiguous | 0.2654 | benign | -0.425 | Destabilizing | 0.83 | D | 0.612 | neutral | N | 0.484348159 | None | None | N |
E/R | 0.7264 | likely_pathogenic | 0.5626 | ambiguous | 0.583 | Stabilizing | 0.866 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/S | 0.4392 | ambiguous | 0.2998 | benign | -0.7 | Destabilizing | 0.48 | N | 0.533 | neutral | None | None | None | None | N |
E/T | 0.5444 | ambiguous | 0.3668 | ambiguous | -0.442 | Destabilizing | 0.866 | D | 0.658 | neutral | None | None | None | None | N |
E/V | 0.608 | likely_pathogenic | 0.4212 | ambiguous | -0.062 | Destabilizing | 0.908 | D | 0.709 | prob.delet. | N | 0.496691969 | None | None | N |
E/W | 0.9731 | likely_pathogenic | 0.9441 | pathogenic | 0.386 | Stabilizing | 0.993 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/Y | 0.8348 | likely_pathogenic | 0.7143 | pathogenic | 0.35 | Stabilizing | 0.993 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.