Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22379 | 67360;67361;67362 | chr2:178580152;178580151;178580150 | chr2:179444879;179444878;179444877 |
N2AB | 20738 | 62437;62438;62439 | chr2:178580152;178580151;178580150 | chr2:179444879;179444878;179444877 |
N2A | 19811 | 59656;59657;59658 | chr2:178580152;178580151;178580150 | chr2:179444879;179444878;179444877 |
N2B | 13314 | 40165;40166;40167 | chr2:178580152;178580151;178580150 | chr2:179444879;179444878;179444877 |
Novex-1 | 13439 | 40540;40541;40542 | chr2:178580152;178580151;178580150 | chr2:179444879;179444878;179444877 |
Novex-2 | 13506 | 40741;40742;40743 | chr2:178580152;178580151;178580150 | chr2:179444879;179444878;179444877 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.005 | N | 0.14 | 0.231 | 0.345859378078 | gnomAD-4.0.0 | 4.79093E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29767E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2011 | likely_benign | 0.2027 | benign | -0.541 | Destabilizing | 0.103 | N | 0.237 | neutral | None | None | None | None | I |
I/C | 0.5835 | likely_pathogenic | 0.6102 | pathogenic | -0.826 | Destabilizing | 0.965 | D | 0.229 | neutral | None | None | None | None | I |
I/D | 0.46 | ambiguous | 0.5249 | ambiguous | -0.382 | Destabilizing | 0.722 | D | 0.323 | neutral | None | None | None | None | I |
I/E | 0.321 | likely_benign | 0.3636 | ambiguous | -0.46 | Destabilizing | 0.722 | D | 0.341 | neutral | None | None | None | None | I |
I/F | 0.189 | likely_benign | 0.2061 | benign | -0.586 | Destabilizing | 0.326 | N | 0.179 | neutral | N | 0.5047415 | None | None | I |
I/G | 0.4457 | ambiguous | 0.4617 | ambiguous | -0.669 | Destabilizing | 0.561 | D | 0.311 | neutral | None | None | None | None | I |
I/H | 0.4276 | ambiguous | 0.4565 | ambiguous | 0.08 | Stabilizing | 0.818 | D | 0.214 | neutral | None | None | None | None | I |
I/K | 0.268 | likely_benign | 0.3122 | benign | -0.438 | Destabilizing | 0.561 | D | 0.309 | neutral | None | None | None | None | I |
I/L | 0.0625 | likely_benign | 0.06 | benign | -0.317 | Destabilizing | None | N | 0.071 | neutral | N | 0.336757577 | None | None | I |
I/M | 0.0927 | likely_benign | 0.0913 | benign | -0.642 | Destabilizing | 0.772 | D | 0.253 | neutral | N | 0.480827278 | None | None | I |
I/N | 0.1828 | likely_benign | 0.2108 | benign | -0.35 | Destabilizing | 0.772 | D | 0.314 | neutral | N | 0.437671146 | None | None | I |
I/P | 0.5217 | ambiguous | 0.5365 | ambiguous | -0.363 | Destabilizing | 0.901 | D | 0.295 | neutral | None | None | None | None | I |
I/Q | 0.2721 | likely_benign | 0.2962 | benign | -0.526 | Destabilizing | 0.901 | D | 0.282 | neutral | None | None | None | None | I |
I/R | 0.2312 | likely_benign | 0.2851 | benign | 0.069 | Stabilizing | 0.901 | D | 0.311 | neutral | None | None | None | None | I |
I/S | 0.1842 | likely_benign | 0.2033 | benign | -0.727 | Destabilizing | 0.166 | N | 0.253 | neutral | N | 0.408791034 | None | None | I |
I/T | 0.1972 | likely_benign | 0.1993 | benign | -0.702 | Destabilizing | 0.005 | N | 0.14 | neutral | N | 0.398382039 | None | None | I |
I/V | 0.0643 | likely_benign | 0.064 | benign | -0.363 | Destabilizing | 0.036 | N | 0.155 | neutral | N | 0.406502877 | None | None | I |
I/W | 0.7849 | likely_pathogenic | 0.7996 | pathogenic | -0.605 | Destabilizing | 0.972 | D | 0.195 | neutral | None | None | None | None | I |
I/Y | 0.4484 | ambiguous | 0.4862 | ambiguous | -0.379 | Destabilizing | 0.004 | N | 0.165 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.