Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22398 | 67417;67418;67419 | chr2:178580095;178580094;178580093 | chr2:179444822;179444821;179444820 |
N2AB | 20757 | 62494;62495;62496 | chr2:178580095;178580094;178580093 | chr2:179444822;179444821;179444820 |
N2A | 19830 | 59713;59714;59715 | chr2:178580095;178580094;178580093 | chr2:179444822;179444821;179444820 |
N2B | 13333 | 40222;40223;40224 | chr2:178580095;178580094;178580093 | chr2:179444822;179444821;179444820 |
Novex-1 | 13458 | 40597;40598;40599 | chr2:178580095;178580094;178580093 | chr2:179444822;179444821;179444820 |
Novex-2 | 13525 | 40798;40799;40800 | chr2:178580095;178580094;178580093 | chr2:179444822;179444821;179444820 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.997 | N | 0.389 | 0.257 | 0.352262096564 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8308 | likely_pathogenic | 0.8199 | pathogenic | -0.382 | Destabilizing | 0.999 | D | 0.417 | neutral | None | None | None | None | N |
R/C | 0.4577 | ambiguous | 0.4035 | ambiguous | -0.294 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
R/D | 0.9458 | likely_pathogenic | 0.945 | pathogenic | -0.024 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
R/E | 0.7674 | likely_pathogenic | 0.7537 | pathogenic | 0.066 | Stabilizing | 0.999 | D | 0.473 | neutral | None | None | None | None | N |
R/F | 0.8777 | likely_pathogenic | 0.875 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
R/G | 0.5939 | likely_pathogenic | 0.572 | pathogenic | -0.647 | Destabilizing | 1.0 | D | 0.536 | neutral | N | 0.511339399 | None | None | N |
R/H | 0.2622 | likely_benign | 0.2367 | benign | -1.065 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | N |
R/I | 0.737 | likely_pathogenic | 0.7382 | pathogenic | 0.306 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
R/K | 0.1858 | likely_benign | 0.1681 | benign | -0.427 | Destabilizing | 0.997 | D | 0.389 | neutral | N | 0.462105444 | None | None | N |
R/L | 0.6224 | likely_pathogenic | 0.5887 | pathogenic | 0.306 | Stabilizing | 1.0 | D | 0.536 | neutral | None | None | None | None | N |
R/M | 0.5614 | ambiguous | 0.5439 | ambiguous | 0.004 | Stabilizing | 1.0 | D | 0.655 | neutral | N | 0.469077833 | None | None | N |
R/N | 0.8754 | likely_pathogenic | 0.8712 | pathogenic | 0.079 | Stabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | N |
R/P | 0.9821 | likely_pathogenic | 0.9855 | pathogenic | 0.098 | Stabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
R/Q | 0.2286 | likely_benign | 0.1994 | benign | -0.107 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
R/S | 0.89 | likely_pathogenic | 0.8786 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.576 | neutral | N | 0.475149312 | None | None | N |
R/T | 0.7396 | likely_pathogenic | 0.7176 | pathogenic | -0.263 | Destabilizing | 1.0 | D | 0.577 | neutral | N | 0.493793788 | None | None | N |
R/V | 0.8158 | likely_pathogenic | 0.8024 | pathogenic | 0.098 | Stabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
R/W | 0.4405 | ambiguous | 0.4266 | ambiguous | -0.223 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.485295984 | None | None | N |
R/Y | 0.7437 | likely_pathogenic | 0.7233 | pathogenic | 0.121 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.