Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22400 | 67423;67424;67425 | chr2:178580089;178580088;178580087 | chr2:179444816;179444815;179444814 |
N2AB | 20759 | 62500;62501;62502 | chr2:178580089;178580088;178580087 | chr2:179444816;179444815;179444814 |
N2A | 19832 | 59719;59720;59721 | chr2:178580089;178580088;178580087 | chr2:179444816;179444815;179444814 |
N2B | 13335 | 40228;40229;40230 | chr2:178580089;178580088;178580087 | chr2:179444816;179444815;179444814 |
Novex-1 | 13460 | 40603;40604;40605 | chr2:178580089;178580088;178580087 | chr2:179444816;179444815;179444814 |
Novex-2 | 13527 | 40804;40805;40806 | chr2:178580089;178580088;178580087 | chr2:179444816;179444815;179444814 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1575883693 | None | 0.984 | N | 0.304 | 0.372 | 0.32306181527 | gnomAD-4.0.0 | 1.59217E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77469E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0879 | likely_benign | 0.0813 | benign | -0.483 | Destabilizing | 0.004 | N | 0.173 | neutral | N | 0.404985512 | None | None | N |
S/C | 0.221 | likely_benign | 0.1831 | benign | -0.396 | Destabilizing | 0.999 | D | 0.349 | neutral | N | 0.502238605 | None | None | N |
S/D | 0.8671 | likely_pathogenic | 0.8811 | pathogenic | 0.377 | Stabilizing | 0.959 | D | 0.286 | neutral | None | None | None | None | N |
S/E | 0.8782 | likely_pathogenic | 0.8863 | pathogenic | 0.308 | Stabilizing | 0.919 | D | 0.269 | neutral | None | None | None | None | N |
S/F | 0.5171 | ambiguous | 0.5351 | ambiguous | -0.952 | Destabilizing | 0.995 | D | 0.449 | neutral | N | 0.490882299 | None | None | N |
S/G | 0.1788 | likely_benign | 0.1726 | benign | -0.626 | Destabilizing | 0.702 | D | 0.353 | neutral | None | None | None | None | N |
S/H | 0.7592 | likely_pathogenic | 0.7619 | pathogenic | -0.973 | Destabilizing | 0.999 | D | 0.349 | neutral | None | None | None | None | N |
S/I | 0.343 | ambiguous | 0.3689 | ambiguous | -0.232 | Destabilizing | 0.976 | D | 0.401 | neutral | None | None | None | None | N |
S/K | 0.9566 | likely_pathogenic | 0.9575 | pathogenic | -0.477 | Destabilizing | 0.919 | D | 0.274 | neutral | None | None | None | None | N |
S/L | 0.2167 | likely_benign | 0.211 | benign | -0.232 | Destabilizing | 0.919 | D | 0.351 | neutral | None | None | None | None | N |
S/M | 0.3434 | ambiguous | 0.3287 | benign | -0.178 | Destabilizing | 0.999 | D | 0.347 | neutral | None | None | None | None | N |
S/N | 0.3824 | ambiguous | 0.4175 | ambiguous | -0.242 | Destabilizing | 0.959 | D | 0.338 | neutral | None | None | None | None | N |
S/P | 0.6938 | likely_pathogenic | 0.7453 | pathogenic | -0.285 | Destabilizing | 0.984 | D | 0.304 | neutral | N | 0.474473111 | None | None | N |
S/Q | 0.8109 | likely_pathogenic | 0.8033 | pathogenic | -0.423 | Destabilizing | 0.988 | D | 0.318 | neutral | None | None | None | None | N |
S/R | 0.9353 | likely_pathogenic | 0.9375 | pathogenic | -0.274 | Destabilizing | 0.988 | D | 0.315 | neutral | None | None | None | None | N |
S/T | 0.1459 | likely_benign | 0.1458 | benign | -0.363 | Destabilizing | 0.78 | D | 0.359 | neutral | N | 0.412431559 | None | None | N |
S/V | 0.3032 | likely_benign | 0.3043 | benign | -0.285 | Destabilizing | 0.851 | D | 0.348 | neutral | None | None | None | None | N |
S/W | 0.7076 | likely_pathogenic | 0.7116 | pathogenic | -0.951 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
S/Y | 0.4361 | ambiguous | 0.4656 | ambiguous | -0.676 | Destabilizing | 0.995 | D | 0.465 | neutral | N | 0.484045444 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.