Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22423 | 67492;67493;67494 | chr2:178580020;178580019;178580018 | chr2:179444747;179444746;179444745 |
N2AB | 20782 | 62569;62570;62571 | chr2:178580020;178580019;178580018 | chr2:179444747;179444746;179444745 |
N2A | 19855 | 59788;59789;59790 | chr2:178580020;178580019;178580018 | chr2:179444747;179444746;179444745 |
N2B | 13358 | 40297;40298;40299 | chr2:178580020;178580019;178580018 | chr2:179444747;179444746;179444745 |
Novex-1 | 13483 | 40672;40673;40674 | chr2:178580020;178580019;178580018 | chr2:179444747;179444746;179444745 |
Novex-2 | 13550 | 40873;40874;40875 | chr2:178580020;178580019;178580018 | chr2:179444747;179444746;179444745 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.994 | N | 0.479 | 0.445 | 0.41337360676 | gnomAD-4.0.0 | 8.40235E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18763E-06 | 0 | 0 |
S/P | None | None | 0.007 | N | 0.229 | 0.193 | 0.126345400529 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0878 | likely_benign | 0.0819 | benign | -0.72 | Destabilizing | 0.012 | N | 0.154 | neutral | N | 0.494372578 | None | None | N |
S/C | 0.0881 | likely_benign | 0.0804 | benign | -0.417 | Destabilizing | 0.994 | D | 0.479 | neutral | N | 0.487866878 | None | None | N |
S/D | 0.5539 | ambiguous | 0.5177 | ambiguous | -0.536 | Destabilizing | 0.854 | D | 0.42 | neutral | None | None | None | None | N |
S/E | 0.5802 | likely_pathogenic | 0.5384 | ambiguous | -0.452 | Destabilizing | 0.742 | D | 0.411 | neutral | None | None | None | None | N |
S/F | 0.2605 | likely_benign | 0.2436 | benign | -0.57 | Destabilizing | 0.979 | D | 0.601 | neutral | N | 0.46801465 | None | None | N |
S/G | 0.1245 | likely_benign | 0.1166 | benign | -1.062 | Destabilizing | 0.373 | N | 0.404 | neutral | None | None | None | None | N |
S/H | 0.414 | ambiguous | 0.3806 | ambiguous | -1.444 | Destabilizing | 0.996 | D | 0.483 | neutral | None | None | None | None | N |
S/I | 0.1784 | likely_benign | 0.1713 | benign | 0.107 | Stabilizing | 0.953 | D | 0.558 | neutral | None | None | None | None | N |
S/K | 0.7544 | likely_pathogenic | 0.7254 | pathogenic | -0.581 | Destabilizing | 0.742 | D | 0.399 | neutral | None | None | None | None | N |
S/L | 0.1099 | likely_benign | 0.1027 | benign | 0.107 | Stabilizing | 0.742 | D | 0.509 | neutral | None | None | None | None | N |
S/M | 0.2011 | likely_benign | 0.1835 | benign | 0.245 | Stabilizing | 0.996 | D | 0.489 | neutral | None | None | None | None | N |
S/N | 0.1493 | likely_benign | 0.1371 | benign | -0.782 | Destabilizing | 0.854 | D | 0.455 | neutral | None | None | None | None | N |
S/P | 0.2136 | likely_benign | 0.2198 | benign | -0.132 | Destabilizing | 0.007 | N | 0.229 | neutral | N | 0.490236195 | None | None | N |
S/Q | 0.5339 | ambiguous | 0.4932 | ambiguous | -0.751 | Destabilizing | 0.953 | D | 0.453 | neutral | None | None | None | None | N |
S/R | 0.6878 | likely_pathogenic | 0.6624 | pathogenic | -0.683 | Destabilizing | 0.953 | D | 0.48 | neutral | None | None | None | None | N |
S/T | 0.0984 | likely_benign | 0.0927 | benign | -0.677 | Destabilizing | 0.472 | N | 0.449 | neutral | N | 0.447349422 | None | None | N |
S/V | 0.1801 | likely_benign | 0.1669 | benign | -0.132 | Destabilizing | 0.742 | D | 0.497 | neutral | None | None | None | None | N |
S/W | 0.3672 | ambiguous | 0.354 | ambiguous | -0.653 | Destabilizing | 0.996 | D | 0.652 | neutral | None | None | None | None | N |
S/Y | 0.1758 | likely_benign | 0.1645 | benign | -0.335 | Destabilizing | 0.979 | D | 0.593 | neutral | N | 0.482182112 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.