Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22425 | 67498;67499;67500 | chr2:178580014;178580013;178580012 | chr2:179444741;179444740;179444739 |
N2AB | 20784 | 62575;62576;62577 | chr2:178580014;178580013;178580012 | chr2:179444741;179444740;179444739 |
N2A | 19857 | 59794;59795;59796 | chr2:178580014;178580013;178580012 | chr2:179444741;179444740;179444739 |
N2B | 13360 | 40303;40304;40305 | chr2:178580014;178580013;178580012 | chr2:179444741;179444740;179444739 |
Novex-1 | 13485 | 40678;40679;40680 | chr2:178580014;178580013;178580012 | chr2:179444741;179444740;179444739 |
Novex-2 | 13552 | 40879;40880;40881 | chr2:178580014;178580013;178580012 | chr2:179444741;179444740;179444739 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.815 | N | 0.544 | 0.369 | 0.697227279014 | gnomAD-4.0.0 | 3.18457E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86599E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8132 | likely_pathogenic | 0.7642 | pathogenic | -2.423 | Highly Destabilizing | 0.543 | D | 0.566 | neutral | None | None | None | None | N |
F/C | 0.3479 | ambiguous | 0.3287 | benign | -1.095 | Destabilizing | 0.007 | N | 0.514 | neutral | N | 0.4798272 | None | None | N |
F/D | 0.9592 | likely_pathogenic | 0.9507 | pathogenic | -2.297 | Highly Destabilizing | 0.984 | D | 0.629 | neutral | None | None | None | None | N |
F/E | 0.9646 | likely_pathogenic | 0.9497 | pathogenic | -2.119 | Highly Destabilizing | 0.953 | D | 0.627 | neutral | None | None | None | None | N |
F/G | 0.9116 | likely_pathogenic | 0.8867 | pathogenic | -2.816 | Highly Destabilizing | 0.854 | D | 0.585 | neutral | None | None | None | None | N |
F/H | 0.6461 | likely_pathogenic | 0.5737 | pathogenic | -1.277 | Destabilizing | 0.91 | D | 0.563 | neutral | None | None | None | None | N |
F/I | 0.5002 | ambiguous | 0.4184 | ambiguous | -1.163 | Destabilizing | 0.684 | D | 0.533 | neutral | N | 0.474824025 | None | None | N |
F/K | 0.9414 | likely_pathogenic | 0.9226 | pathogenic | -1.298 | Destabilizing | 0.953 | D | 0.613 | neutral | None | None | None | None | N |
F/L | 0.924 | likely_pathogenic | 0.8999 | pathogenic | -1.163 | Destabilizing | 0.309 | N | 0.573 | neutral | N | 0.479499126 | None | None | N |
F/M | 0.7685 | likely_pathogenic | 0.7015 | pathogenic | -0.867 | Destabilizing | 0.984 | D | 0.541 | neutral | None | None | None | None | N |
F/N | 0.7941 | likely_pathogenic | 0.7511 | pathogenic | -1.629 | Destabilizing | 0.953 | D | 0.624 | neutral | None | None | None | None | N |
F/P | 0.9985 | likely_pathogenic | 0.9984 | pathogenic | -1.589 | Destabilizing | 0.984 | D | 0.649 | neutral | None | None | None | None | N |
F/Q | 0.8819 | likely_pathogenic | 0.841 | pathogenic | -1.633 | Destabilizing | 0.953 | D | 0.649 | neutral | None | None | None | None | N |
F/R | 0.849 | likely_pathogenic | 0.8196 | pathogenic | -0.85 | Destabilizing | 0.953 | D | 0.633 | neutral | None | None | None | None | N |
F/S | 0.6713 | likely_pathogenic | 0.5938 | pathogenic | -2.287 | Highly Destabilizing | 0.815 | D | 0.544 | neutral | N | 0.474802595 | None | None | N |
F/T | 0.7839 | likely_pathogenic | 0.7169 | pathogenic | -2.013 | Highly Destabilizing | 0.854 | D | 0.567 | neutral | None | None | None | None | N |
F/V | 0.4507 | ambiguous | 0.3865 | ambiguous | -1.589 | Destabilizing | 0.684 | D | 0.55 | neutral | N | 0.471186287 | None | None | N |
F/W | 0.6379 | likely_pathogenic | 0.6049 | pathogenic | -0.106 | Destabilizing | 0.953 | D | 0.565 | neutral | None | None | None | None | N |
F/Y | 0.0811 | likely_benign | 0.0825 | benign | -0.409 | Destabilizing | 0.007 | N | 0.294 | neutral | N | 0.394555087 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.