Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22429 | 67510;67511;67512 | chr2:178580002;178580001;178580000 | chr2:179444729;179444728;179444727 |
N2AB | 20788 | 62587;62588;62589 | chr2:178580002;178580001;178580000 | chr2:179444729;179444728;179444727 |
N2A | 19861 | 59806;59807;59808 | chr2:178580002;178580001;178580000 | chr2:179444729;179444728;179444727 |
N2B | 13364 | 40315;40316;40317 | chr2:178580002;178580001;178580000 | chr2:179444729;179444728;179444727 |
Novex-1 | 13489 | 40690;40691;40692 | chr2:178580002;178580001;178580000 | chr2:179444729;179444728;179444727 |
Novex-2 | 13556 | 40891;40892;40893 | chr2:178580002;178580001;178580000 | chr2:179444729;179444728;179444727 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs879180662 | -1.843 | None | N | 0.194 | 0.284 | 0.260249123532 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
F/L | rs879180662 | -1.843 | None | N | 0.194 | 0.284 | 0.260249123532 | gnomAD-4.0.0 | 3.18462E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86017E-06 | 0 | 3.02627E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.4806 | ambiguous | 0.4758 | ambiguous | -3.268 | Highly Destabilizing | 0.103 | N | 0.641 | neutral | None | None | None | None | N |
F/C | 0.2663 | likely_benign | 0.2399 | benign | -1.793 | Destabilizing | 0.954 | D | 0.679 | prob.neutral | N | 0.482520789 | None | None | N |
F/D | 0.8925 | likely_pathogenic | 0.8698 | pathogenic | -3.362 | Highly Destabilizing | 0.561 | D | 0.696 | prob.neutral | None | None | None | None | N |
F/E | 0.8738 | likely_pathogenic | 0.8403 | pathogenic | -3.214 | Highly Destabilizing | 0.561 | D | 0.682 | prob.neutral | None | None | None | None | N |
F/G | 0.8165 | likely_pathogenic | 0.8029 | pathogenic | -3.638 | Highly Destabilizing | 0.39 | N | 0.682 | prob.neutral | None | None | None | None | N |
F/H | 0.6434 | likely_pathogenic | 0.5815 | pathogenic | -1.911 | Destabilizing | 0.965 | D | 0.693 | prob.neutral | None | None | None | None | N |
F/I | 0.4013 | ambiguous | 0.3855 | ambiguous | -2.06 | Highly Destabilizing | 0.166 | N | 0.525 | neutral | N | 0.448253499 | None | None | N |
F/K | 0.9076 | likely_pathogenic | 0.9079 | pathogenic | -2.173 | Highly Destabilizing | 0.561 | D | 0.695 | prob.neutral | None | None | None | None | N |
F/L | 0.7316 | likely_pathogenic | 0.6643 | pathogenic | -2.06 | Highly Destabilizing | None | N | 0.194 | neutral | N | 0.369966074 | None | None | N |
F/M | 0.3989 | ambiguous | 0.3595 | ambiguous | -1.588 | Destabilizing | 0.818 | D | 0.657 | neutral | None | None | None | None | N |
F/N | 0.7082 | likely_pathogenic | 0.6627 | pathogenic | -2.45 | Highly Destabilizing | 0.561 | D | 0.713 | prob.delet. | None | None | None | None | N |
F/P | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -2.472 | Highly Destabilizing | 0.901 | D | 0.725 | prob.delet. | None | None | None | None | N |
F/Q | 0.7742 | likely_pathogenic | 0.7354 | pathogenic | -2.559 | Highly Destabilizing | 0.818 | D | 0.727 | prob.delet. | None | None | None | None | N |
F/R | 0.8135 | likely_pathogenic | 0.8145 | pathogenic | -1.382 | Destabilizing | 0.818 | D | 0.718 | prob.delet. | None | None | None | None | N |
F/S | 0.328 | likely_benign | 0.3183 | benign | -3.076 | Highly Destabilizing | 0.005 | N | 0.5 | neutral | N | 0.39168814 | None | None | N |
F/T | 0.4591 | ambiguous | 0.4265 | ambiguous | -2.842 | Highly Destabilizing | 0.209 | N | 0.66 | neutral | None | None | None | None | N |
F/V | 0.3549 | ambiguous | 0.3341 | benign | -2.472 | Highly Destabilizing | 0.166 | N | 0.643 | neutral | N | 0.436420353 | None | None | N |
F/W | 0.5859 | likely_pathogenic | 0.5688 | pathogenic | -0.874 | Destabilizing | 0.991 | D | 0.665 | neutral | None | None | None | None | N |
F/Y | 0.1932 | likely_benign | 0.1788 | benign | -1.261 | Destabilizing | 0.856 | D | 0.567 | neutral | N | 0.458142419 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.