Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22433 | 67522;67523;67524 | chr2:178579990;178579989;178579988 | chr2:179444717;179444716;179444715 |
N2AB | 20792 | 62599;62600;62601 | chr2:178579990;178579989;178579988 | chr2:179444717;179444716;179444715 |
N2A | 19865 | 59818;59819;59820 | chr2:178579990;178579989;178579988 | chr2:179444717;179444716;179444715 |
N2B | 13368 | 40327;40328;40329 | chr2:178579990;178579989;178579988 | chr2:179444717;179444716;179444715 |
Novex-1 | 13493 | 40702;40703;40704 | chr2:178579990;178579989;178579988 | chr2:179444717;179444716;179444715 |
Novex-2 | 13560 | 40903;40904;40905 | chr2:178579990;178579989;178579988 | chr2:179444717;179444716;179444715 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.704 | N | 0.298 | 0.074 | 0.194818534648 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/G | rs2047336036 | None | 0.826 | N | 0.423 | 0.235 | 0.285316908763 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs2047336036 | None | 0.826 | N | 0.423 | 0.235 | 0.285316908763 | gnomAD-4.0.0 | 6.5741E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47076E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2758 | likely_benign | 0.3482 | ambiguous | -0.834 | Destabilizing | 0.134 | N | 0.173 | neutral | N | 0.497546169 | None | None | I |
E/C | 0.9371 | likely_pathogenic | 0.9523 | pathogenic | -0.449 | Destabilizing | 0.999 | D | 0.399 | neutral | None | None | None | None | I |
E/D | 0.3701 | ambiguous | 0.4485 | ambiguous | -0.54 | Destabilizing | 0.704 | D | 0.298 | neutral | N | 0.515478569 | None | None | I |
E/F | 0.9449 | likely_pathogenic | 0.9688 | pathogenic | -0.337 | Destabilizing | 0.991 | D | 0.435 | neutral | None | None | None | None | I |
E/G | 0.5205 | ambiguous | 0.6441 | pathogenic | -1.086 | Destabilizing | 0.826 | D | 0.423 | neutral | N | 0.471677364 | None | None | I |
E/H | 0.8007 | likely_pathogenic | 0.8775 | pathogenic | -0.053 | Destabilizing | 0.991 | D | 0.25 | neutral | None | None | None | None | I |
E/I | 0.4483 | ambiguous | 0.497 | ambiguous | -0.172 | Destabilizing | 0.17 | N | 0.397 | neutral | None | None | None | None | I |
E/K | 0.2609 | likely_benign | 0.4035 | ambiguous | -0.059 | Destabilizing | 0.92 | D | 0.293 | neutral | N | 0.453352675 | None | None | I |
E/L | 0.684 | likely_pathogenic | 0.7724 | pathogenic | -0.172 | Destabilizing | 0.759 | D | 0.446 | neutral | None | None | None | None | I |
E/M | 0.676 | likely_pathogenic | 0.7331 | pathogenic | -0.015 | Destabilizing | 0.991 | D | 0.411 | neutral | None | None | None | None | I |
E/N | 0.5822 | likely_pathogenic | 0.6802 | pathogenic | -0.647 | Destabilizing | 0.079 | N | 0.107 | neutral | None | None | None | None | I |
E/P | 0.7124 | likely_pathogenic | 0.8235 | pathogenic | -0.373 | Destabilizing | 0.997 | D | 0.378 | neutral | None | None | None | None | I |
E/Q | 0.2446 | likely_benign | 0.3176 | benign | -0.556 | Destabilizing | 0.959 | D | 0.282 | neutral | N | 0.505146932 | None | None | I |
E/R | 0.4276 | ambiguous | 0.5934 | pathogenic | 0.327 | Stabilizing | 0.969 | D | 0.277 | neutral | None | None | None | None | I |
E/S | 0.453 | ambiguous | 0.5511 | ambiguous | -0.814 | Destabilizing | 0.759 | D | 0.288 | neutral | None | None | None | None | I |
E/T | 0.3952 | ambiguous | 0.5 | ambiguous | -0.593 | Destabilizing | 0.939 | D | 0.368 | neutral | None | None | None | None | I |
E/V | 0.3356 | likely_benign | 0.4031 | ambiguous | -0.373 | Destabilizing | 0.704 | D | 0.422 | neutral | N | 0.465772924 | None | None | I |
E/W | 0.9879 | likely_pathogenic | 0.994 | pathogenic | -0.017 | Destabilizing | 0.999 | D | 0.521 | neutral | None | None | None | None | I |
E/Y | 0.8947 | likely_pathogenic | 0.9406 | pathogenic | -0.069 | Destabilizing | 0.997 | D | 0.432 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.