Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22496 | 67711;67712;67713 | chr2:178579711;178579710;178579709 | chr2:179444438;179444437;179444436 |
N2AB | 20855 | 62788;62789;62790 | chr2:178579711;178579710;178579709 | chr2:179444438;179444437;179444436 |
N2A | 19928 | 60007;60008;60009 | chr2:178579711;178579710;178579709 | chr2:179444438;179444437;179444436 |
N2B | 13431 | 40516;40517;40518 | chr2:178579711;178579710;178579709 | chr2:179444438;179444437;179444436 |
Novex-1 | 13556 | 40891;40892;40893 | chr2:178579711;178579710;178579709 | chr2:179444438;179444437;179444436 |
Novex-2 | 13623 | 41092;41093;41094 | chr2:178579711;178579710;178579709 | chr2:179444438;179444437;179444436 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs397517669 | -0.205 | 0.955 | N | 0.497 | 0.206 | 0.231873229951 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.57E-05 | 0 |
K/R | rs397517669 | -0.205 | 0.955 | N | 0.497 | 0.206 | 0.231873229951 | gnomAD-4.0.0 | 1.43722E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79929E-05 | 0 | 1.65739E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.318 | likely_benign | 0.2915 | benign | -0.157 | Destabilizing | 0.983 | D | 0.521 | neutral | None | None | None | None | N |
K/C | 0.5889 | likely_pathogenic | 0.5489 | ambiguous | -0.203 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/D | 0.5107 | ambiguous | 0.4941 | ambiguous | 0.092 | Stabilizing | 0.995 | D | 0.541 | neutral | None | None | None | None | N |
K/E | 0.1616 | likely_benign | 0.1578 | benign | 0.132 | Stabilizing | 0.955 | D | 0.517 | neutral | N | 0.467415263 | None | None | N |
K/F | 0.7457 | likely_pathogenic | 0.7468 | pathogenic | -0.156 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
K/G | 0.4002 | ambiguous | 0.3781 | ambiguous | -0.428 | Destabilizing | 0.995 | D | 0.529 | neutral | None | None | None | None | N |
K/H | 0.2735 | likely_benign | 0.252 | benign | -0.767 | Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
K/I | 0.2823 | likely_benign | 0.2868 | benign | 0.496 | Stabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/L | 0.345 | ambiguous | 0.3389 | benign | 0.496 | Stabilizing | 0.995 | D | 0.529 | neutral | None | None | None | None | N |
K/M | 0.2379 | likely_benign | 0.2358 | benign | 0.331 | Stabilizing | 0.999 | D | 0.587 | neutral | N | 0.473877227 | None | None | N |
K/N | 0.3392 | likely_benign | 0.331 | benign | 0.075 | Stabilizing | 0.993 | D | 0.554 | neutral | N | 0.504512214 | None | None | N |
K/P | 0.8655 | likely_pathogenic | 0.8747 | pathogenic | 0.309 | Stabilizing | 0.998 | D | 0.557 | neutral | None | None | None | None | N |
K/Q | 0.1163 | likely_benign | 0.1098 | benign | -0.072 | Destabilizing | 0.568 | D | 0.41 | neutral | N | 0.492852425 | None | None | N |
K/R | 0.0853 | likely_benign | 0.0812 | benign | -0.242 | Destabilizing | 0.955 | D | 0.497 | neutral | N | 0.467706052 | None | None | N |
K/S | 0.3458 | ambiguous | 0.328 | benign | -0.476 | Destabilizing | 0.983 | D | 0.531 | neutral | None | None | None | None | N |
K/T | 0.1444 | likely_benign | 0.1372 | benign | -0.264 | Destabilizing | 0.993 | D | 0.553 | neutral | N | 0.483232865 | None | None | N |
K/V | 0.2604 | likely_benign | 0.2582 | benign | 0.309 | Stabilizing | 0.998 | D | 0.602 | neutral | None | None | None | None | N |
K/W | 0.7944 | likely_pathogenic | 0.7765 | pathogenic | -0.11 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/Y | 0.5989 | likely_pathogenic | 0.5879 | pathogenic | 0.207 | Stabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.