Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22509 | 67750;67751;67752 | chr2:178579672;178579671;178579670 | chr2:179444399;179444398;179444397 |
N2AB | 20868 | 62827;62828;62829 | chr2:178579672;178579671;178579670 | chr2:179444399;179444398;179444397 |
N2A | 19941 | 60046;60047;60048 | chr2:178579672;178579671;178579670 | chr2:179444399;179444398;179444397 |
N2B | 13444 | 40555;40556;40557 | chr2:178579672;178579671;178579670 | chr2:179444399;179444398;179444397 |
Novex-1 | 13569 | 40930;40931;40932 | chr2:178579672;178579671;178579670 | chr2:179444399;179444398;179444397 |
Novex-2 | 13636 | 41131;41132;41133 | chr2:178579672;178579671;178579670 | chr2:179444399;179444398;179444397 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.484 | N | 0.547 | 0.214 | 0.235038932564 | gnomAD-4.0.0 | 1.59222E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77778E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0798 | likely_benign | 0.0832 | benign | -0.585 | Destabilizing | 0.012 | N | 0.273 | neutral | N | 0.470130281 | None | None | N |
S/C | 0.0979 | likely_benign | 0.0988 | benign | -0.372 | Destabilizing | 0.78 | D | 0.505 | neutral | N | 0.494065934 | None | None | N |
S/D | 0.2735 | likely_benign | 0.2908 | benign | 0.152 | Stabilizing | 0.149 | N | 0.421 | neutral | None | None | None | None | N |
S/E | 0.3096 | likely_benign | 0.3353 | benign | 0.111 | Stabilizing | 0.149 | N | 0.41 | neutral | None | None | None | None | N |
S/F | 0.1421 | likely_benign | 0.1719 | benign | -0.956 | Destabilizing | None | N | 0.43 | neutral | N | 0.512747695 | None | None | N |
S/G | 0.1102 | likely_benign | 0.1094 | benign | -0.777 | Destabilizing | 0.067 | N | 0.439 | neutral | None | None | None | None | N |
S/H | 0.2174 | likely_benign | 0.2222 | benign | -1.221 | Destabilizing | 0.791 | D | 0.516 | neutral | None | None | None | None | N |
S/I | 0.1033 | likely_benign | 0.1104 | benign | -0.195 | Destabilizing | 0.081 | N | 0.52 | neutral | None | None | None | None | N |
S/K | 0.4648 | ambiguous | 0.5039 | ambiguous | -0.574 | Destabilizing | 0.149 | N | 0.397 | neutral | None | None | None | None | N |
S/L | 0.0783 | likely_benign | 0.0883 | benign | -0.195 | Destabilizing | 0.035 | N | 0.461 | neutral | None | None | None | None | N |
S/M | 0.1537 | likely_benign | 0.1561 | benign | -0.017 | Destabilizing | 0.555 | D | 0.523 | neutral | None | None | None | None | N |
S/N | 0.1158 | likely_benign | 0.1081 | benign | -0.393 | Destabilizing | 0.149 | N | 0.449 | neutral | None | None | None | None | N |
S/P | 0.2773 | likely_benign | 0.3727 | ambiguous | -0.292 | Destabilizing | 0.484 | N | 0.547 | neutral | N | 0.489678834 | None | None | N |
S/Q | 0.3366 | likely_benign | 0.343 | ambiguous | -0.543 | Destabilizing | 0.555 | D | 0.514 | neutral | None | None | None | None | N |
S/R | 0.3804 | ambiguous | 0.432 | ambiguous | -0.433 | Destabilizing | 0.38 | N | 0.553 | neutral | None | None | None | None | N |
S/T | 0.0611 | likely_benign | 0.0604 | benign | -0.456 | Destabilizing | None | N | 0.145 | neutral | N | 0.353510967 | None | None | N |
S/V | 0.1064 | likely_benign | 0.1104 | benign | -0.292 | Destabilizing | 0.002 | N | 0.423 | neutral | None | None | None | None | N |
S/W | 0.2669 | likely_benign | 0.3169 | benign | -0.949 | Destabilizing | 0.935 | D | 0.595 | neutral | None | None | None | None | N |
S/Y | 0.1448 | likely_benign | 0.1708 | benign | -0.681 | Destabilizing | 0.188 | N | 0.599 | neutral | N | 0.504589572 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.