Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22518 | 67777;67778;67779 | chr2:178579645;178579644;178579643 | chr2:179444372;179444371;179444370 |
N2AB | 20877 | 62854;62855;62856 | chr2:178579645;178579644;178579643 | chr2:179444372;179444371;179444370 |
N2A | 19950 | 60073;60074;60075 | chr2:178579645;178579644;178579643 | chr2:179444372;179444371;179444370 |
N2B | 13453 | 40582;40583;40584 | chr2:178579645;178579644;178579643 | chr2:179444372;179444371;179444370 |
Novex-1 | 13578 | 40957;40958;40959 | chr2:178579645;178579644;178579643 | chr2:179444372;179444371;179444370 |
Novex-2 | 13645 | 41158;41159;41160 | chr2:178579645;178579644;178579643 | chr2:179444372;179444371;179444370 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs371063328 | 0.119 | 0.865 | N | 0.528 | 0.235 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 1.29216E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs371063328 | 0.119 | 0.865 | N | 0.528 | 0.235 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs371063328 | 0.119 | 0.865 | N | 0.528 | 0.235 | None | gnomAD-4.0.0 | 1.31543E-05 | None | None | None | None | N | None | 4.82812E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | None | None | 0.284 | N | 0.244 | 0.165 | 0.248417906384 | gnomAD-4.0.0 | 2.40078E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62517E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1105 | likely_benign | 0.1091 | benign | -0.507 | Destabilizing | 0.865 | D | 0.601 | neutral | N | 0.472738364 | None | None | N |
E/C | 0.7618 | likely_pathogenic | 0.7658 | pathogenic | -0.332 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
E/D | 0.1902 | likely_benign | 0.17 | benign | -0.571 | Destabilizing | 0.928 | D | 0.451 | neutral | N | 0.468610534 | None | None | N |
E/F | 0.7092 | likely_pathogenic | 0.7201 | pathogenic | 0.029 | Stabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
E/G | 0.1607 | likely_benign | 0.1659 | benign | -0.784 | Destabilizing | 0.978 | D | 0.676 | prob.neutral | N | 0.489628078 | None | None | N |
E/H | 0.443 | ambiguous | 0.4552 | ambiguous | 0.272 | Stabilizing | 0.996 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/I | 0.2489 | likely_benign | 0.2441 | benign | 0.218 | Stabilizing | 0.992 | D | 0.787 | deleterious | None | None | None | None | N |
E/K | 0.132 | likely_benign | 0.1445 | benign | 0.133 | Stabilizing | 0.865 | D | 0.528 | neutral | N | 0.517884156 | None | None | N |
E/L | 0.3177 | likely_benign | 0.3147 | benign | 0.218 | Stabilizing | 0.983 | D | 0.775 | deleterious | None | None | None | None | N |
E/M | 0.3506 | ambiguous | 0.3456 | ambiguous | 0.243 | Stabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/N | 0.243 | likely_benign | 0.229 | benign | -0.491 | Destabilizing | 0.983 | D | 0.706 | prob.neutral | None | None | None | None | N |
E/P | 0.3425 | ambiguous | 0.3219 | benign | -0.003 | Destabilizing | 0.992 | D | 0.785 | deleterious | None | None | None | None | N |
E/Q | 0.1178 | likely_benign | 0.1234 | benign | -0.385 | Destabilizing | 0.284 | N | 0.244 | neutral | N | 0.515075924 | None | None | N |
E/R | 0.2216 | likely_benign | 0.245 | benign | 0.505 | Stabilizing | 0.968 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/S | 0.1764 | likely_benign | 0.1695 | benign | -0.655 | Destabilizing | 0.895 | D | 0.605 | neutral | None | None | None | None | N |
E/T | 0.1422 | likely_benign | 0.1411 | benign | -0.413 | Destabilizing | 0.983 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/V | 0.1385 | likely_benign | 0.1384 | benign | -0.003 | Destabilizing | 0.978 | D | 0.779 | deleterious | N | 0.471777313 | None | None | N |
E/W | 0.875 | likely_pathogenic | 0.8859 | pathogenic | 0.311 | Stabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | N |
E/Y | 0.5983 | likely_pathogenic | 0.6036 | pathogenic | 0.309 | Stabilizing | 0.992 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.