Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22519 | 67780;67781;67782 | chr2:178579642;178579641;178579640 | chr2:179444369;179444368;179444367 |
N2AB | 20878 | 62857;62858;62859 | chr2:178579642;178579641;178579640 | chr2:179444369;179444368;179444367 |
N2A | 19951 | 60076;60077;60078 | chr2:178579642;178579641;178579640 | chr2:179444369;179444368;179444367 |
N2B | 13454 | 40585;40586;40587 | chr2:178579642;178579641;178579640 | chr2:179444369;179444368;179444367 |
Novex-1 | 13579 | 40960;40961;40962 | chr2:178579642;178579641;178579640 | chr2:179444369;179444368;179444367 |
Novex-2 | 13646 | 41161;41162;41163 | chr2:178579642;178579641;178579640 | chr2:179444369;179444368;179444367 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | rs779007987 | -3.311 | 1.0 | D | 0.887 | 0.917 | 0.921835126833 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
Y/D | rs779007987 | -3.311 | 1.0 | D | 0.887 | 0.917 | 0.921835126833 | gnomAD-4.0.0 | 6.15957E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19748E-06 | 0 | 1.65717E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9634 | likely_pathogenic | 0.9645 | pathogenic | -2.234 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
Y/C | 0.6777 | likely_pathogenic | 0.6817 | pathogenic | -1.249 | Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.663417144 | None | None | N |
Y/D | 0.9755 | likely_pathogenic | 0.9757 | pathogenic | -1.424 | Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.663417144 | None | None | N |
Y/E | 0.9879 | likely_pathogenic | 0.9876 | pathogenic | -1.251 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/F | 0.1988 | likely_benign | 0.1869 | benign | -0.602 | Destabilizing | 0.999 | D | 0.775 | deleterious | D | 0.616560963 | None | None | N |
Y/G | 0.9404 | likely_pathogenic | 0.9452 | pathogenic | -2.62 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
Y/H | 0.7897 | likely_pathogenic | 0.7725 | pathogenic | -1.021 | Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.647397783 | None | None | N |
Y/I | 0.8156 | likely_pathogenic | 0.7946 | pathogenic | -1.015 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Y/K | 0.9731 | likely_pathogenic | 0.9706 | pathogenic | -1.464 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Y/L | 0.8146 | likely_pathogenic | 0.8236 | pathogenic | -1.015 | Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
Y/M | 0.8762 | likely_pathogenic | 0.8711 | pathogenic | -0.866 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Y/N | 0.811 | likely_pathogenic | 0.8178 | pathogenic | -2.087 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.66321534 | None | None | N |
Y/P | 0.9974 | likely_pathogenic | 0.9974 | pathogenic | -1.424 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
Y/Q | 0.9708 | likely_pathogenic | 0.9708 | pathogenic | -1.838 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
Y/R | 0.9511 | likely_pathogenic | 0.9509 | pathogenic | -1.267 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
Y/S | 0.9273 | likely_pathogenic | 0.9307 | pathogenic | -2.613 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.663417144 | None | None | N |
Y/T | 0.9538 | likely_pathogenic | 0.9512 | pathogenic | -2.326 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
Y/V | 0.7562 | likely_pathogenic | 0.73 | pathogenic | -1.424 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
Y/W | 0.7765 | likely_pathogenic | 0.7478 | pathogenic | -0.006 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.