Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22528 | 67807;67808;67809 | chr2:178579615;178579614;178579613 | chr2:179444342;179444341;179444340 |
N2AB | 20887 | 62884;62885;62886 | chr2:178579615;178579614;178579613 | chr2:179444342;179444341;179444340 |
N2A | 19960 | 60103;60104;60105 | chr2:178579615;178579614;178579613 | chr2:179444342;179444341;179444340 |
N2B | 13463 | 40612;40613;40614 | chr2:178579615;178579614;178579613 | chr2:179444342;179444341;179444340 |
Novex-1 | 13588 | 40987;40988;40989 | chr2:178579615;178579614;178579613 | chr2:179444342;179444341;179444340 |
Novex-2 | 13655 | 41188;41189;41190 | chr2:178579615;178579614;178579613 | chr2:179444342;179444341;179444340 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1416365418 | 0.77 | 0.645 | N | 0.513 | 0.299 | 0.264081493735 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1416365418 | 0.77 | 0.645 | N | 0.513 | 0.299 | 0.264081493735 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1416365418 | 0.77 | 0.645 | N | 0.513 | 0.299 | 0.264081493735 | gnomAD-4.0.0 | 3.84521E-06 | None | None | None | None | I | None | 1.69153E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.789E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1742 | likely_benign | 0.1973 | benign | -0.424 | Destabilizing | 0.645 | D | 0.543 | neutral | N | 0.451485806 | None | None | I |
E/C | 0.8623 | likely_pathogenic | 0.8903 | pathogenic | 0.106 | Stabilizing | 0.995 | D | 0.695 | prob.neutral | None | None | None | None | I |
E/D | 0.1296 | likely_benign | 0.144 | benign | -0.354 | Destabilizing | 0.002 | N | 0.257 | neutral | N | 0.439519373 | None | None | I |
E/F | 0.7947 | likely_pathogenic | 0.8562 | pathogenic | -0.39 | Destabilizing | 0.995 | D | 0.604 | neutral | None | None | None | None | I |
E/G | 0.2013 | likely_benign | 0.2238 | benign | -0.626 | Destabilizing | 0.645 | D | 0.467 | neutral | N | 0.497946027 | None | None | I |
E/H | 0.5464 | ambiguous | 0.6164 | pathogenic | -0.326 | Destabilizing | 0.995 | D | 0.543 | neutral | None | None | None | None | I |
E/I | 0.3324 | likely_benign | 0.4099 | ambiguous | 0.073 | Stabilizing | 0.945 | D | 0.617 | neutral | None | None | None | None | I |
E/K | 0.1683 | likely_benign | 0.1988 | benign | 0.392 | Stabilizing | 0.645 | D | 0.513 | neutral | N | 0.435305632 | None | None | I |
E/L | 0.4356 | ambiguous | 0.5119 | ambiguous | 0.073 | Stabilizing | 0.945 | D | 0.589 | neutral | None | None | None | None | I |
E/M | 0.485 | ambiguous | 0.5793 | pathogenic | 0.307 | Stabilizing | 0.995 | D | 0.606 | neutral | None | None | None | None | I |
E/N | 0.2994 | likely_benign | 0.3676 | ambiguous | 0.09 | Stabilizing | 0.809 | D | 0.525 | neutral | None | None | None | None | I |
E/P | 0.6539 | likely_pathogenic | 0.6626 | pathogenic | -0.073 | Destabilizing | 0.945 | D | 0.538 | neutral | None | None | None | None | I |
E/Q | 0.1631 | likely_benign | 0.1905 | benign | 0.122 | Stabilizing | 0.864 | D | 0.488 | neutral | N | 0.477672329 | None | None | I |
E/R | 0.2791 | likely_benign | 0.3238 | benign | 0.478 | Stabilizing | 0.945 | D | 0.556 | neutral | None | None | None | None | I |
E/S | 0.2343 | likely_benign | 0.2697 | benign | -0.067 | Destabilizing | 0.547 | D | 0.512 | neutral | None | None | None | None | I |
E/T | 0.2679 | likely_benign | 0.3123 | benign | 0.1 | Stabilizing | 0.894 | D | 0.505 | neutral | None | None | None | None | I |
E/V | 0.2292 | likely_benign | 0.2822 | benign | -0.073 | Destabilizing | 0.928 | D | 0.549 | neutral | N | 0.480173917 | None | None | I |
E/W | 0.9117 | likely_pathogenic | 0.9371 | pathogenic | -0.253 | Destabilizing | 0.995 | D | 0.701 | prob.neutral | None | None | None | None | I |
E/Y | 0.6776 | likely_pathogenic | 0.7531 | pathogenic | -0.144 | Destabilizing | 0.995 | D | 0.583 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.