Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22561 | 67906;67907;67908 | chr2:178579349;178579348;178579347 | chr2:179444076;179444075;179444074 |
N2AB | 20920 | 62983;62984;62985 | chr2:178579349;178579348;178579347 | chr2:179444076;179444075;179444074 |
N2A | 19993 | 60202;60203;60204 | chr2:178579349;178579348;178579347 | chr2:179444076;179444075;179444074 |
N2B | 13496 | 40711;40712;40713 | chr2:178579349;178579348;178579347 | chr2:179444076;179444075;179444074 |
Novex-1 | 13621 | 41086;41087;41088 | chr2:178579349;178579348;178579347 | chr2:179444076;179444075;179444074 |
Novex-2 | 13688 | 41287;41288;41289 | chr2:178579349;178579348;178579347 | chr2:179444076;179444075;179444074 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs876658076 | None | 0.966 | N | 0.353 | 0.164 | 0.281381271821 | gnomAD-4.0.0 | 1.38023E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80786E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2551 | likely_benign | 0.2514 | benign | -0.955 | Destabilizing | 0.525 | D | 0.406 | neutral | None | None | None | None | I |
L/C | 0.5538 | ambiguous | 0.5607 | ambiguous | -0.683 | Destabilizing | 0.998 | D | 0.321 | neutral | None | None | None | None | I |
L/D | 0.7169 | likely_pathogenic | 0.7022 | pathogenic | -0.34 | Destabilizing | 0.949 | D | 0.363 | neutral | None | None | None | None | I |
L/E | 0.4092 | ambiguous | 0.3849 | ambiguous | -0.369 | Destabilizing | 0.949 | D | 0.367 | neutral | None | None | None | None | I |
L/F | 0.1521 | likely_benign | 0.1516 | benign | -0.657 | Destabilizing | 0.966 | D | 0.353 | neutral | N | 0.446954272 | None | None | I |
L/G | 0.6268 | likely_pathogenic | 0.6292 | pathogenic | -1.194 | Destabilizing | 0.949 | D | 0.355 | neutral | None | None | None | None | I |
L/H | 0.2278 | likely_benign | 0.2293 | benign | -0.297 | Destabilizing | 0.998 | D | 0.342 | neutral | None | None | None | None | I |
L/I | 0.0722 | likely_benign | 0.0731 | benign | -0.405 | Destabilizing | 0.029 | N | 0.233 | neutral | None | None | None | None | I |
L/K | 0.3548 | ambiguous | 0.3505 | ambiguous | -0.585 | Destabilizing | 0.949 | D | 0.365 | neutral | None | None | None | None | I |
L/M | 0.1146 | likely_benign | 0.1174 | benign | -0.521 | Destabilizing | 0.966 | D | 0.355 | neutral | N | 0.458075343 | None | None | I |
L/N | 0.3873 | ambiguous | 0.3863 | ambiguous | -0.438 | Destabilizing | 0.949 | D | 0.359 | neutral | None | None | None | None | I |
L/P | 0.4729 | ambiguous | 0.4346 | ambiguous | -0.556 | Destabilizing | 0.974 | D | 0.357 | neutral | None | None | None | None | I |
L/Q | 0.186 | likely_benign | 0.1852 | benign | -0.589 | Destabilizing | 0.974 | D | 0.349 | neutral | None | None | None | None | I |
L/R | 0.2569 | likely_benign | 0.2577 | benign | -0.045 | Destabilizing | 0.974 | D | 0.358 | neutral | None | None | None | None | I |
L/S | 0.2887 | likely_benign | 0.2844 | benign | -0.96 | Destabilizing | 0.669 | D | 0.399 | neutral | N | 0.426885644 | None | None | I |
L/T | 0.1461 | likely_benign | 0.143 | benign | -0.872 | Destabilizing | 0.029 | N | 0.252 | neutral | None | None | None | None | I |
L/V | 0.0688 | likely_benign | 0.0694 | benign | -0.556 | Destabilizing | 0.005 | N | 0.199 | neutral | N | 0.34869422 | None | None | I |
L/W | 0.2943 | likely_benign | 0.2932 | benign | -0.695 | Destabilizing | 0.997 | D | 0.424 | neutral | N | 0.477007821 | None | None | I |
L/Y | 0.3736 | ambiguous | 0.369 | ambiguous | -0.464 | Destabilizing | 0.991 | D | 0.313 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.