Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22572 | 67939;67940;67941 | chr2:178579316;178579315;178579314 | chr2:179444043;179444042;179444041 |
N2AB | 20931 | 63016;63017;63018 | chr2:178579316;178579315;178579314 | chr2:179444043;179444042;179444041 |
N2A | 20004 | 60235;60236;60237 | chr2:178579316;178579315;178579314 | chr2:179444043;179444042;179444041 |
N2B | 13507 | 40744;40745;40746 | chr2:178579316;178579315;178579314 | chr2:179444043;179444042;179444041 |
Novex-1 | 13632 | 41119;41120;41121 | chr2:178579316;178579315;178579314 | chr2:179444043;179444042;179444041 |
Novex-2 | 13699 | 41320;41321;41322 | chr2:178579316;178579315;178579314 | chr2:179444043;179444042;179444041 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs779301386 | -1.444 | 0.217 | N | 0.471 | 0.26 | 0.355658859761 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
I/F | rs779301386 | -1.444 | 0.217 | N | 0.471 | 0.26 | 0.355658859761 | gnomAD-4.0.0 | 1.60123E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87743E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.969 | likely_pathogenic | 0.9636 | pathogenic | -1.809 | Destabilizing | 0.996 | D | 0.62 | neutral | None | None | None | None | I |
I/C | 0.9569 | likely_pathogenic | 0.953 | pathogenic | -1.201 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
I/D | 0.9976 | likely_pathogenic | 0.9973 | pathogenic | -1.248 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
I/E | 0.9961 | likely_pathogenic | 0.995 | pathogenic | -1.186 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
I/F | 0.4106 | ambiguous | 0.408 | ambiguous | -1.152 | Destabilizing | 0.217 | N | 0.471 | neutral | N | 0.460389375 | None | None | I |
I/G | 0.9924 | likely_pathogenic | 0.9905 | pathogenic | -2.184 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
I/H | 0.9869 | likely_pathogenic | 0.9843 | pathogenic | -1.239 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
I/K | 0.9905 | likely_pathogenic | 0.9874 | pathogenic | -1.312 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
I/L | 0.2324 | likely_benign | 0.2124 | benign | -0.822 | Destabilizing | 0.889 | D | 0.548 | neutral | N | 0.452792052 | None | None | I |
I/M | 0.3485 | ambiguous | 0.3497 | ambiguous | -0.723 | Destabilizing | 0.999 | D | 0.639 | neutral | N | 0.510947036 | None | None | I |
I/N | 0.9655 | likely_pathogenic | 0.959 | pathogenic | -1.277 | Destabilizing | 0.999 | D | 0.817 | deleterious | N | 0.483773549 | None | None | I |
I/P | 0.9949 | likely_pathogenic | 0.9936 | pathogenic | -1.121 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
I/Q | 0.9908 | likely_pathogenic | 0.9886 | pathogenic | -1.358 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
I/R | 0.9872 | likely_pathogenic | 0.984 | pathogenic | -0.749 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
I/S | 0.9727 | likely_pathogenic | 0.9686 | pathogenic | -1.932 | Destabilizing | 0.999 | D | 0.743 | deleterious | N | 0.471910265 | None | None | I |
I/T | 0.9763 | likely_pathogenic | 0.9703 | pathogenic | -1.734 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | N | 0.459882396 | None | None | I |
I/V | 0.2058 | likely_benign | 0.191 | benign | -1.121 | Destabilizing | 0.941 | D | 0.533 | neutral | N | 0.44643141 | None | None | I |
I/W | 0.9752 | likely_pathogenic | 0.9729 | pathogenic | -1.239 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
I/Y | 0.8918 | likely_pathogenic | 0.884 | pathogenic | -1.021 | Destabilizing | 0.995 | D | 0.681 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.