Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22582 | 67969;67970;67971 | chr2:178579286;178579285;178579284 | chr2:179444013;179444012;179444011 |
N2AB | 20941 | 63046;63047;63048 | chr2:178579286;178579285;178579284 | chr2:179444013;179444012;179444011 |
N2A | 20014 | 60265;60266;60267 | chr2:178579286;178579285;178579284 | chr2:179444013;179444012;179444011 |
N2B | 13517 | 40774;40775;40776 | chr2:178579286;178579285;178579284 | chr2:179444013;179444012;179444011 |
Novex-1 | 13642 | 41149;41150;41151 | chr2:178579286;178579285;178579284 | chr2:179444013;179444012;179444011 |
Novex-2 | 13709 | 41350;41351;41352 | chr2:178579286;178579285;178579284 | chr2:179444013;179444012;179444011 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.034 | D | 0.376 | 0.464 | 0.529661991002 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3309 | likely_benign | 0.2834 | benign | -1.542 | Destabilizing | 0.034 | N | 0.376 | neutral | D | 0.578783885 | None | None | I |
V/C | 0.7719 | likely_pathogenic | 0.7615 | pathogenic | -1.327 | Destabilizing | 0.996 | D | 0.681 | prob.neutral | None | None | None | None | I |
V/D | 0.9529 | likely_pathogenic | 0.9296 | pathogenic | -0.92 | Destabilizing | 0.949 | D | 0.835 | deleterious | D | 0.608758496 | None | None | I |
V/E | 0.899 | likely_pathogenic | 0.8572 | pathogenic | -0.845 | Destabilizing | 0.961 | D | 0.805 | deleterious | None | None | None | None | I |
V/F | 0.4133 | ambiguous | 0.3721 | ambiguous | -1.093 | Destabilizing | 0.901 | D | 0.689 | prob.neutral | D | 0.559257423 | None | None | I |
V/G | 0.6182 | likely_pathogenic | 0.5588 | ambiguous | -1.94 | Destabilizing | 0.901 | D | 0.811 | deleterious | D | 0.608758496 | None | None | I |
V/H | 0.9419 | likely_pathogenic | 0.9217 | pathogenic | -1.538 | Destabilizing | 0.996 | D | 0.838 | deleterious | None | None | None | None | I |
V/I | 0.079 | likely_benign | 0.0805 | benign | -0.521 | Destabilizing | 0.008 | N | 0.253 | neutral | N | 0.501435489 | None | None | I |
V/K | 0.9079 | likely_pathogenic | 0.873 | pathogenic | -1.174 | Destabilizing | 0.961 | D | 0.806 | deleterious | None | None | None | None | I |
V/L | 0.3615 | ambiguous | 0.3629 | ambiguous | -0.521 | Destabilizing | 0.156 | N | 0.597 | neutral | D | 0.54321842 | None | None | I |
V/M | 0.3043 | likely_benign | 0.2975 | benign | -0.576 | Destabilizing | 0.923 | D | 0.599 | neutral | None | None | None | None | I |
V/N | 0.8529 | likely_pathogenic | 0.8086 | pathogenic | -1.102 | Destabilizing | 0.987 | D | 0.839 | deleterious | None | None | None | None | I |
V/P | 0.8777 | likely_pathogenic | 0.8773 | pathogenic | -0.826 | Destabilizing | 0.961 | D | 0.807 | deleterious | None | None | None | None | I |
V/Q | 0.8542 | likely_pathogenic | 0.8157 | pathogenic | -1.114 | Destabilizing | 0.987 | D | 0.821 | deleterious | None | None | None | None | I |
V/R | 0.8651 | likely_pathogenic | 0.8268 | pathogenic | -0.896 | Destabilizing | 0.961 | D | 0.835 | deleterious | None | None | None | None | I |
V/S | 0.5905 | likely_pathogenic | 0.522 | ambiguous | -1.794 | Destabilizing | 0.858 | D | 0.788 | deleterious | None | None | None | None | I |
V/T | 0.4929 | ambiguous | 0.4407 | ambiguous | -1.577 | Destabilizing | 0.775 | D | 0.637 | neutral | None | None | None | None | I |
V/W | 0.9697 | likely_pathogenic | 0.9628 | pathogenic | -1.319 | Destabilizing | 0.996 | D | 0.826 | deleterious | None | None | None | None | I |
V/Y | 0.8476 | likely_pathogenic | 0.8135 | pathogenic | -0.98 | Destabilizing | 0.961 | D | 0.678 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.