Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22588 | 67987;67988;67989 | chr2:178579268;178579267;178579266 | chr2:179443995;179443994;179443993 |
N2AB | 20947 | 63064;63065;63066 | chr2:178579268;178579267;178579266 | chr2:179443995;179443994;179443993 |
N2A | 20020 | 60283;60284;60285 | chr2:178579268;178579267;178579266 | chr2:179443995;179443994;179443993 |
N2B | 13523 | 40792;40793;40794 | chr2:178579268;178579267;178579266 | chr2:179443995;179443994;179443993 |
Novex-1 | 13648 | 41167;41168;41169 | chr2:178579268;178579267;178579266 | chr2:179443995;179443994;179443993 |
Novex-2 | 13715 | 41368;41369;41370 | chr2:178579268;178579267;178579266 | chr2:179443995;179443994;179443993 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.978 | N | 0.49 | 0.312 | 0.309530620856 | gnomAD-4.0.0 | 1.59225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85995E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.122 | likely_benign | 0.123 | benign | -0.059 | Destabilizing | 0.989 | D | 0.451 | neutral | N | 0.471004568 | None | None | N |
E/C | 0.7293 | likely_pathogenic | 0.7369 | pathogenic | 0.029 | Stabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
E/D | 0.069 | likely_benign | 0.068 | benign | -0.102 | Destabilizing | 0.054 | N | 0.232 | neutral | N | 0.367375981 | None | None | N |
E/F | 0.6332 | likely_pathogenic | 0.6396 | pathogenic | -0.141 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
E/G | 0.1169 | likely_benign | 0.1173 | benign | -0.183 | Destabilizing | 0.978 | D | 0.462 | neutral | N | 0.354977113 | None | None | N |
E/H | 0.3816 | ambiguous | 0.3955 | ambiguous | 0.335 | Stabilizing | 0.999 | D | 0.443 | neutral | None | None | None | None | N |
E/I | 0.2412 | likely_benign | 0.2506 | benign | 0.209 | Stabilizing | 0.999 | D | 0.573 | neutral | None | None | None | None | N |
E/K | 0.1082 | likely_benign | 0.1182 | benign | 0.494 | Stabilizing | 0.978 | D | 0.49 | neutral | N | 0.445356762 | None | None | N |
E/L | 0.3013 | likely_benign | 0.3113 | benign | 0.209 | Stabilizing | 0.998 | D | 0.56 | neutral | None | None | None | None | N |
E/M | 0.3212 | likely_benign | 0.324 | benign | 0.124 | Stabilizing | 1.0 | D | 0.524 | neutral | None | None | None | None | N |
E/N | 0.1395 | likely_benign | 0.1368 | benign | 0.382 | Stabilizing | 0.983 | D | 0.439 | neutral | None | None | None | None | N |
E/P | 0.337 | likely_benign | 0.3245 | benign | 0.138 | Stabilizing | 0.999 | D | 0.455 | neutral | None | None | None | None | N |
E/Q | 0.1353 | likely_benign | 0.1392 | benign | 0.377 | Stabilizing | 0.989 | D | 0.448 | neutral | N | 0.450167936 | None | None | N |
E/R | 0.2152 | likely_benign | 0.2287 | benign | 0.666 | Stabilizing | 0.998 | D | 0.463 | neutral | None | None | None | None | N |
E/S | 0.1297 | likely_benign | 0.1272 | benign | 0.186 | Stabilizing | 0.983 | D | 0.465 | neutral | None | None | None | None | N |
E/T | 0.1415 | likely_benign | 0.1377 | benign | 0.288 | Stabilizing | 0.992 | D | 0.431 | neutral | None | None | None | None | N |
E/V | 0.1583 | likely_benign | 0.1662 | benign | 0.138 | Stabilizing | 0.999 | D | 0.475 | neutral | N | 0.501231474 | None | None | N |
E/W | 0.7972 | likely_pathogenic | 0.8064 | pathogenic | -0.094 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
E/Y | 0.5193 | ambiguous | 0.5205 | ambiguous | 0.088 | Stabilizing | 0.999 | D | 0.521 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.