Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2259 | 7000;7001;7002 | chr2:178774936;178774935;178774934 | chr2:179639663;179639662;179639661 |
N2AB | 2259 | 7000;7001;7002 | chr2:178774936;178774935;178774934 | chr2:179639663;179639662;179639661 |
N2A | 2259 | 7000;7001;7002 | chr2:178774936;178774935;178774934 | chr2:179639663;179639662;179639661 |
N2B | 2213 | 6862;6863;6864 | chr2:178774936;178774935;178774934 | chr2:179639663;179639662;179639661 |
Novex-1 | 2213 | 6862;6863;6864 | chr2:178774936;178774935;178774934 | chr2:179639663;179639662;179639661 |
Novex-2 | 2213 | 6862;6863;6864 | chr2:178774936;178774935;178774934 | chr2:179639663;179639662;179639661 |
Novex-3 | 2259 | 7000;7001;7002 | chr2:178774936;178774935;178774934 | chr2:179639663;179639662;179639661 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.961 | N | 0.593 | 0.355 | 0.341934017632 | gnomAD-4.0.0 | 2.05276E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52245E-05 | None | 0 | 0 | 1.79882E-06 | 0 | 0 |
K/Q | None | None | 0.961 | N | 0.631 | 0.319 | 0.244539031024 | gnomAD-4.0.0 | 6.84252E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99408E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4963 | ambiguous | 0.4955 | ambiguous | -0.683 | Destabilizing | 0.97 | D | 0.666 | neutral | None | None | None | None | N |
K/C | 0.7591 | likely_pathogenic | 0.7359 | pathogenic | -0.682 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/D | 0.776 | likely_pathogenic | 0.7909 | pathogenic | -0.226 | Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/E | 0.2725 | likely_benign | 0.295 | benign | -0.106 | Destabilizing | 0.961 | D | 0.593 | neutral | N | 0.500670191 | None | None | N |
K/F | 0.8355 | likely_pathogenic | 0.8376 | pathogenic | -0.312 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/G | 0.6537 | likely_pathogenic | 0.6581 | pathogenic | -1.066 | Destabilizing | 0.985 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/H | 0.292 | likely_benign | 0.2848 | benign | -1.372 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/I | 0.5441 | ambiguous | 0.5494 | ambiguous | 0.314 | Stabilizing | 0.998 | D | 0.742 | deleterious | D | 0.567023902 | None | None | N |
K/L | 0.5116 | ambiguous | 0.5166 | ambiguous | 0.314 | Stabilizing | 0.97 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/M | 0.3434 | ambiguous | 0.3436 | ambiguous | 0.214 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/N | 0.4707 | ambiguous | 0.4841 | ambiguous | -0.603 | Destabilizing | 0.98 | D | 0.613 | neutral | N | 0.511657503 | None | None | N |
K/P | 0.9347 | likely_pathogenic | 0.9351 | pathogenic | 0.012 | Stabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
K/Q | 0.1551 | likely_benign | 0.156 | benign | -0.664 | Destabilizing | 0.961 | D | 0.631 | neutral | N | 0.506290888 | None | None | N |
K/R | 0.0889 | likely_benign | 0.0888 | benign | -0.714 | Destabilizing | 0.031 | N | 0.174 | neutral | N | 0.475610947 | None | None | N |
K/S | 0.487 | ambiguous | 0.4907 | ambiguous | -1.283 | Destabilizing | 0.985 | D | 0.575 | neutral | None | None | None | None | N |
K/T | 0.243 | likely_benign | 0.2444 | benign | -0.95 | Destabilizing | 0.98 | D | 0.701 | prob.neutral | N | 0.486883882 | None | None | N |
K/V | 0.4842 | ambiguous | 0.4839 | ambiguous | 0.012 | Stabilizing | 0.996 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/W | 0.8402 | likely_pathogenic | 0.8364 | pathogenic | -0.17 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/Y | 0.7239 | likely_pathogenic | 0.7285 | pathogenic | 0.107 | Stabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.