Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22593 | 68002;68003;68004 | chr2:178579253;178579252;178579251 | chr2:179443980;179443979;179443978 |
N2AB | 20952 | 63079;63080;63081 | chr2:178579253;178579252;178579251 | chr2:179443980;179443979;179443978 |
N2A | 20025 | 60298;60299;60300 | chr2:178579253;178579252;178579251 | chr2:179443980;179443979;179443978 |
N2B | 13528 | 40807;40808;40809 | chr2:178579253;178579252;178579251 | chr2:179443980;179443979;179443978 |
Novex-1 | 13653 | 41182;41183;41184 | chr2:178579253;178579252;178579251 | chr2:179443980;179443979;179443978 |
Novex-2 | 13720 | 41383;41384;41385 | chr2:178579253;178579252;178579251 | chr2:179443980;179443979;179443978 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.349 | N | 0.401 | 0.052 | 0.17948927462 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0653 | likely_benign | 0.0637 | benign | -0.32 | Destabilizing | 0.003 | N | 0.202 | neutral | N | 0.46381289 | None | None | N |
T/C | 0.3688 | ambiguous | 0.3565 | ambiguous | -0.264 | Destabilizing | 0.989 | D | 0.496 | neutral | None | None | None | None | N |
T/D | 0.2741 | likely_benign | 0.2584 | benign | 0.206 | Stabilizing | 0.961 | D | 0.413 | neutral | None | None | None | None | N |
T/E | 0.1977 | likely_benign | 0.194 | benign | 0.123 | Stabilizing | 0.775 | D | 0.429 | neutral | None | None | None | None | N |
T/F | 0.2346 | likely_benign | 0.2278 | benign | -0.913 | Destabilizing | 0.923 | D | 0.588 | neutral | None | None | None | None | N |
T/G | 0.1568 | likely_benign | 0.1489 | benign | -0.423 | Destabilizing | 0.633 | D | 0.47 | neutral | None | None | None | None | N |
T/H | 0.229 | likely_benign | 0.2153 | benign | -0.774 | Destabilizing | 0.996 | D | 0.611 | neutral | None | None | None | None | N |
T/I | 0.1462 | likely_benign | 0.1453 | benign | -0.174 | Destabilizing | 0.309 | N | 0.408 | neutral | N | 0.488903335 | None | None | N |
T/K | 0.1417 | likely_benign | 0.1375 | benign | -0.299 | Destabilizing | 0.775 | D | 0.427 | neutral | None | None | None | None | N |
T/L | 0.0928 | likely_benign | 0.0929 | benign | -0.174 | Destabilizing | 0.415 | N | 0.413 | neutral | None | None | None | None | N |
T/M | 0.0899 | likely_benign | 0.091 | benign | -0.018 | Destabilizing | 0.961 | D | 0.488 | neutral | None | None | None | None | N |
T/N | 0.1135 | likely_benign | 0.1054 | benign | -0.106 | Destabilizing | 0.949 | D | 0.399 | neutral | N | 0.463255529 | None | None | N |
T/P | 0.0927 | likely_benign | 0.0882 | benign | -0.195 | Destabilizing | 0.949 | D | 0.434 | neutral | N | 0.456174841 | None | None | N |
T/Q | 0.1641 | likely_benign | 0.1586 | benign | -0.318 | Destabilizing | 0.961 | D | 0.465 | neutral | None | None | None | None | N |
T/R | 0.1295 | likely_benign | 0.1274 | benign | -0.082 | Destabilizing | 0.923 | D | 0.472 | neutral | None | None | None | None | N |
T/S | 0.0887 | likely_benign | 0.0847 | benign | -0.291 | Destabilizing | 0.349 | N | 0.401 | neutral | N | 0.451150237 | None | None | N |
T/V | 0.1073 | likely_benign | 0.1095 | benign | -0.195 | Destabilizing | 0.011 | N | 0.233 | neutral | None | None | None | None | N |
T/W | 0.5333 | ambiguous | 0.5205 | ambiguous | -0.948 | Destabilizing | 0.996 | D | 0.645 | neutral | None | None | None | None | N |
T/Y | 0.2706 | likely_benign | 0.262 | benign | -0.642 | Destabilizing | 0.961 | D | 0.597 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.