Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22610 | 68053;68054;68055 | chr2:178579202;178579201;178579200 | chr2:179443929;179443928;179443927 |
N2AB | 20969 | 63130;63131;63132 | chr2:178579202;178579201;178579200 | chr2:179443929;179443928;179443927 |
N2A | 20042 | 60349;60350;60351 | chr2:178579202;178579201;178579200 | chr2:179443929;179443928;179443927 |
N2B | 13545 | 40858;40859;40860 | chr2:178579202;178579201;178579200 | chr2:179443929;179443928;179443927 |
Novex-1 | 13670 | 41233;41234;41235 | chr2:178579202;178579201;178579200 | chr2:179443929;179443928;179443927 |
Novex-2 | 13737 | 41434;41435;41436 | chr2:178579202;178579201;178579200 | chr2:179443929;179443928;179443927 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.994 | N | 0.667 | 0.348 | 0.68758794608 | gnomAD-4.0.0 | 3.18377E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71922E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5852 | likely_pathogenic | 0.5223 | ambiguous | -2.041 | Highly Destabilizing | 0.978 | D | 0.667 | neutral | N | 0.486532612 | None | None | N |
V/C | 0.8534 | likely_pathogenic | 0.8261 | pathogenic | -1.54 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
V/D | 0.9849 | likely_pathogenic | 0.978 | pathogenic | -2.701 | Highly Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
V/E | 0.9635 | likely_pathogenic | 0.9492 | pathogenic | -2.464 | Highly Destabilizing | 0.999 | D | 0.843 | deleterious | N | 0.48729308 | None | None | N |
V/F | 0.52 | ambiguous | 0.4649 | ambiguous | -1.177 | Destabilizing | 0.995 | D | 0.763 | deleterious | None | None | None | None | N |
V/G | 0.7504 | likely_pathogenic | 0.6974 | pathogenic | -2.58 | Highly Destabilizing | 0.999 | D | 0.844 | deleterious | N | 0.48729308 | None | None | N |
V/H | 0.9659 | likely_pathogenic | 0.9521 | pathogenic | -2.4 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
V/I | 0.0895 | likely_benign | 0.0867 | benign | -0.524 | Destabilizing | 0.437 | N | 0.301 | neutral | None | None | None | None | N |
V/K | 0.9338 | likely_pathogenic | 0.9104 | pathogenic | -1.546 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
V/L | 0.3803 | ambiguous | 0.3579 | ambiguous | -0.524 | Destabilizing | 0.121 | N | 0.371 | neutral | N | 0.441013388 | None | None | N |
V/M | 0.3751 | ambiguous | 0.3496 | ambiguous | -0.668 | Destabilizing | 0.994 | D | 0.667 | neutral | N | 0.474512673 | None | None | N |
V/N | 0.9369 | likely_pathogenic | 0.9128 | pathogenic | -1.942 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
V/P | 0.984 | likely_pathogenic | 0.9798 | pathogenic | -1.005 | Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
V/Q | 0.9248 | likely_pathogenic | 0.8998 | pathogenic | -1.74 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
V/R | 0.896 | likely_pathogenic | 0.8639 | pathogenic | -1.478 | Destabilizing | 0.999 | D | 0.836 | deleterious | None | None | None | None | N |
V/S | 0.8012 | likely_pathogenic | 0.7495 | pathogenic | -2.529 | Highly Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
V/T | 0.7043 | likely_pathogenic | 0.6512 | pathogenic | -2.151 | Highly Destabilizing | 0.992 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/W | 0.9825 | likely_pathogenic | 0.9765 | pathogenic | -1.735 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
V/Y | 0.9185 | likely_pathogenic | 0.8907 | pathogenic | -1.351 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.