Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22618 | 68077;68078;68079 | chr2:178579178;178579177;178579176 | chr2:179443905;179443904;179443903 |
N2AB | 20977 | 63154;63155;63156 | chr2:178579178;178579177;178579176 | chr2:179443905;179443904;179443903 |
N2A | 20050 | 60373;60374;60375 | chr2:178579178;178579177;178579176 | chr2:179443905;179443904;179443903 |
N2B | 13553 | 40882;40883;40884 | chr2:178579178;178579177;178579176 | chr2:179443905;179443904;179443903 |
Novex-1 | 13678 | 41257;41258;41259 | chr2:178579178;178579177;178579176 | chr2:179443905;179443904;179443903 |
Novex-2 | 13745 | 41458;41459;41460 | chr2:178579178;178579177;178579176 | chr2:179443905;179443904;179443903 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 1.0 | N | 0.726 | 0.414 | 0.414798848334 | gnomAD-4.0.0 | 1.59182E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85945E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.555 | ambiguous | 0.5549 | ambiguous | -0.88 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
A/D | 0.5927 | likely_pathogenic | 0.589 | pathogenic | -0.353 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.501470088 | None | None | N |
A/E | 0.4646 | ambiguous | 0.4467 | ambiguous | -0.445 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
A/F | 0.5382 | ambiguous | 0.5431 | ambiguous | -0.984 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
A/G | 0.1386 | likely_benign | 0.142 | benign | -0.824 | Destabilizing | 1.0 | D | 0.582 | neutral | D | 0.535291773 | None | None | N |
A/H | 0.6639 | likely_pathogenic | 0.6713 | pathogenic | -0.839 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
A/I | 0.4919 | ambiguous | 0.4742 | ambiguous | -0.398 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
A/K | 0.6973 | likely_pathogenic | 0.677 | pathogenic | -0.81 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
A/L | 0.3909 | ambiguous | 0.3816 | ambiguous | -0.398 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
A/M | 0.3525 | ambiguous | 0.3474 | ambiguous | -0.395 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
A/N | 0.457 | ambiguous | 0.4664 | ambiguous | -0.511 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
A/P | 0.9326 | likely_pathogenic | 0.933 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.814 | deleterious | D | 0.532198096 | None | None | N |
A/Q | 0.4955 | ambiguous | 0.4818 | ambiguous | -0.718 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
A/R | 0.5732 | likely_pathogenic | 0.5593 | ambiguous | -0.437 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
A/S | 0.0921 | likely_benign | 0.1013 | benign | -0.884 | Destabilizing | 1.0 | D | 0.607 | neutral | N | 0.471912298 | None | None | N |
A/T | 0.1178 | likely_benign | 0.118 | benign | -0.877 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | N | 0.500928483 | None | None | N |
A/V | 0.2656 | likely_benign | 0.2566 | benign | -0.446 | Destabilizing | 1.0 | D | 0.674 | neutral | N | 0.496950638 | None | None | N |
A/W | 0.8957 | likely_pathogenic | 0.8966 | pathogenic | -1.176 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
A/Y | 0.6951 | likely_pathogenic | 0.6797 | pathogenic | -0.802 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.