Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22622 | 68089;68090;68091 | chr2:178579166;178579165;178579164 | chr2:179443893;179443892;179443891 |
N2AB | 20981 | 63166;63167;63168 | chr2:178579166;178579165;178579164 | chr2:179443893;179443892;179443891 |
N2A | 20054 | 60385;60386;60387 | chr2:178579166;178579165;178579164 | chr2:179443893;179443892;179443891 |
N2B | 13557 | 40894;40895;40896 | chr2:178579166;178579165;178579164 | chr2:179443893;179443892;179443891 |
Novex-1 | 13682 | 41269;41270;41271 | chr2:178579166;178579165;178579164 | chr2:179443893;179443892;179443891 |
Novex-2 | 13749 | 41470;41471;41472 | chr2:178579166;178579165;178579164 | chr2:179443893;179443892;179443891 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.989 | N | 0.507 | 0.362 | 0.303123707472 | gnomAD-4.0.0 | 3.18415E-06 | None | None | None | None | N | None | 5.66316E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85995E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0891 | likely_benign | 0.0869 | benign | -1.326 | Destabilizing | 0.989 | D | 0.507 | neutral | N | 0.473168167 | None | None | N |
T/C | 0.3197 | likely_benign | 0.3022 | benign | -1.057 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
T/D | 0.5426 | ambiguous | 0.5153 | ambiguous | -1.456 | Destabilizing | 0.995 | D | 0.603 | neutral | None | None | None | None | N |
T/E | 0.4145 | ambiguous | 0.3855 | ambiguous | -1.285 | Destabilizing | 0.998 | D | 0.602 | neutral | None | None | None | None | N |
T/F | 0.2575 | likely_benign | 0.2473 | benign | -1.075 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/G | 0.256 | likely_benign | 0.2388 | benign | -1.704 | Destabilizing | 0.992 | D | 0.577 | neutral | None | None | None | None | N |
T/H | 0.2355 | likely_benign | 0.2168 | benign | -1.783 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/I | 0.1353 | likely_benign | 0.1361 | benign | -0.343 | Destabilizing | 0.978 | D | 0.572 | neutral | N | 0.462292387 | None | None | N |
T/K | 0.2003 | likely_benign | 0.1879 | benign | -0.608 | Destabilizing | 0.997 | D | 0.605 | neutral | N | 0.461051393 | None | None | N |
T/L | 0.1135 | likely_benign | 0.113 | benign | -0.343 | Destabilizing | 0.983 | D | 0.51 | neutral | None | None | None | None | N |
T/M | 0.0988 | likely_benign | 0.1032 | benign | -0.339 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | N |
T/N | 0.1615 | likely_benign | 0.1554 | benign | -1.169 | Destabilizing | 0.784 | D | 0.379 | neutral | None | None | None | None | N |
T/P | 0.4672 | ambiguous | 0.5247 | ambiguous | -0.641 | Destabilizing | 0.999 | D | 0.649 | neutral | N | 0.497148225 | None | None | N |
T/Q | 0.2365 | likely_benign | 0.2208 | benign | -1.067 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
T/R | 0.1543 | likely_benign | 0.1469 | benign | -0.704 | Destabilizing | 0.998 | D | 0.651 | neutral | N | 0.510621749 | None | None | N |
T/S | 0.1243 | likely_benign | 0.1188 | benign | -1.428 | Destabilizing | 0.989 | D | 0.507 | neutral | N | 0.459138835 | None | None | N |
T/V | 0.1095 | likely_benign | 0.1154 | benign | -0.641 | Destabilizing | 0.611 | D | 0.417 | neutral | None | None | None | None | N |
T/W | 0.6018 | likely_pathogenic | 0.5895 | pathogenic | -1.131 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/Y | 0.3076 | likely_benign | 0.2994 | benign | -0.784 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.