Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22624 | 68095;68096;68097 | chr2:178579160;178579159;178579158 | chr2:179443887;179443886;179443885 |
N2AB | 20983 | 63172;63173;63174 | chr2:178579160;178579159;178579158 | chr2:179443887;179443886;179443885 |
N2A | 20056 | 60391;60392;60393 | chr2:178579160;178579159;178579158 | chr2:179443887;179443886;179443885 |
N2B | 13559 | 40900;40901;40902 | chr2:178579160;178579159;178579158 | chr2:179443887;179443886;179443885 |
Novex-1 | 13684 | 41275;41276;41277 | chr2:178579160;178579159;178579158 | chr2:179443887;179443886;179443885 |
Novex-2 | 13751 | 41476;41477;41478 | chr2:178579160;178579159;178579158 | chr2:179443887;179443886;179443885 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.007 | N | 0.513 | 0.29 | 0.317084106153 | gnomAD-4.0.0 | 1.59209E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8599E-06 | 0 | 0 |
T/K | rs761798459 | -0.637 | 0.213 | N | 0.654 | 0.3 | 0.3349148499 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
T/K | rs761798459 | -0.637 | 0.213 | N | 0.654 | 0.3 | 0.3349148499 | gnomAD-4.0.0 | 1.59209E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8599E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1207 | likely_benign | 0.1079 | benign | -1.063 | Destabilizing | 0.101 | N | 0.465 | neutral | N | 0.490340819 | None | None | N |
T/C | 0.3385 | likely_benign | 0.3308 | benign | -0.875 | Destabilizing | 0.983 | D | 0.655 | neutral | None | None | None | None | N |
T/D | 0.7009 | likely_pathogenic | 0.613 | pathogenic | -0.892 | Destabilizing | 0.264 | N | 0.655 | neutral | None | None | None | None | N |
T/E | 0.4791 | ambiguous | 0.4129 | ambiguous | -0.817 | Destabilizing | 0.418 | N | 0.657 | neutral | None | None | None | None | N |
T/F | 0.2383 | likely_benign | 0.2106 | benign | -0.905 | Destabilizing | 0.836 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/G | 0.4186 | ambiguous | 0.366 | ambiguous | -1.382 | Destabilizing | 0.264 | N | 0.677 | prob.neutral | None | None | None | None | N |
T/H | 0.2836 | likely_benign | 0.2667 | benign | -1.574 | Destabilizing | 0.005 | N | 0.595 | neutral | None | None | None | None | N |
T/I | 0.1266 | likely_benign | 0.115 | benign | -0.278 | Destabilizing | 0.007 | N | 0.513 | neutral | N | 0.485209669 | None | None | N |
T/K | 0.3251 | likely_benign | 0.3126 | benign | -0.821 | Destabilizing | 0.213 | N | 0.654 | neutral | N | 0.515375074 | None | None | N |
T/L | 0.1039 | likely_benign | 0.0962 | benign | -0.278 | Destabilizing | 0.129 | N | 0.613 | neutral | None | None | None | None | N |
T/M | 0.092 | likely_benign | 0.0925 | benign | -0.11 | Destabilizing | 0.836 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/N | 0.2268 | likely_benign | 0.1869 | benign | -1.023 | Destabilizing | 0.01 | N | 0.406 | neutral | None | None | None | None | N |
T/P | 0.8245 | likely_pathogenic | 0.8035 | pathogenic | -0.507 | Destabilizing | 0.794 | D | 0.732 | prob.delet. | N | 0.521322316 | None | None | N |
T/Q | 0.2886 | likely_benign | 0.273 | benign | -1.115 | Destabilizing | 0.716 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/R | 0.2564 | likely_benign | 0.242 | benign | -0.691 | Destabilizing | 0.655 | D | 0.714 | prob.delet. | N | 0.514068352 | None | None | N |
T/S | 0.1458 | likely_benign | 0.1289 | benign | -1.294 | Destabilizing | 0.007 | N | 0.267 | neutral | N | 0.50425679 | None | None | N |
T/V | 0.1159 | likely_benign | 0.1122 | benign | -0.507 | Destabilizing | 0.01 | N | 0.249 | neutral | None | None | None | None | N |
T/W | 0.627 | likely_pathogenic | 0.5944 | pathogenic | -0.858 | Destabilizing | 0.983 | D | 0.698 | prob.neutral | None | None | None | None | N |
T/Y | 0.3225 | likely_benign | 0.2896 | benign | -0.592 | Destabilizing | 0.716 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.