Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22637 | 68134;68135;68136 | chr2:178579121;178579120;178579119 | chr2:179443848;179443847;179443846 |
N2AB | 20996 | 63211;63212;63213 | chr2:178579121;178579120;178579119 | chr2:179443848;179443847;179443846 |
N2A | 20069 | 60430;60431;60432 | chr2:178579121;178579120;178579119 | chr2:179443848;179443847;179443846 |
N2B | 13572 | 40939;40940;40941 | chr2:178579121;178579120;178579119 | chr2:179443848;179443847;179443846 |
Novex-1 | 13697 | 41314;41315;41316 | chr2:178579121;178579120;178579119 | chr2:179443848;179443847;179443846 |
Novex-2 | 13764 | 41515;41516;41517 | chr2:178579121;178579120;178579119 | chr2:179443848;179443847;179443846 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs1233992072 | -0.117 | 0.612 | N | 0.46 | 0.355 | 0.547039986869 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
S/C | rs1233992072 | -0.117 | 0.612 | N | 0.46 | 0.355 | 0.547039986869 | gnomAD-4.0.0 | 1.59214E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85977E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0822 | likely_benign | 0.0811 | benign | -0.409 | Destabilizing | None | N | 0.161 | neutral | N | 0.503872788 | None | None | I |
S/C | 0.0955 | likely_benign | 0.1022 | benign | -0.368 | Destabilizing | 0.612 | D | 0.46 | neutral | N | 0.495193119 | None | None | I |
S/D | 0.32 | likely_benign | 0.2943 | benign | 0.417 | Stabilizing | None | N | 0.212 | neutral | None | None | None | None | I |
S/E | 0.4407 | ambiguous | 0.4258 | ambiguous | 0.395 | Stabilizing | 0.016 | N | 0.271 | neutral | None | None | None | None | I |
S/F | 0.1141 | likely_benign | 0.1131 | benign | -0.737 | Destabilizing | None | N | 0.235 | neutral | N | 0.450155733 | None | None | I |
S/G | 0.1174 | likely_benign | 0.1141 | benign | -0.616 | Destabilizing | 0.016 | N | 0.297 | neutral | None | None | None | None | I |
S/H | 0.2319 | likely_benign | 0.2379 | benign | -1.03 | Destabilizing | 0.356 | N | 0.476 | neutral | None | None | None | None | I |
S/I | 0.1225 | likely_benign | 0.1216 | benign | 0.019 | Stabilizing | 0.038 | N | 0.511 | neutral | None | None | None | None | I |
S/K | 0.6136 | likely_pathogenic | 0.5963 | pathogenic | -0.39 | Destabilizing | 0.038 | N | 0.237 | neutral | None | None | None | None | I |
S/L | 0.0929 | likely_benign | 0.0907 | benign | 0.019 | Stabilizing | 0.016 | N | 0.479 | neutral | None | None | None | None | I |
S/M | 0.1487 | likely_benign | 0.1433 | benign | -0.004 | Destabilizing | 0.356 | N | 0.475 | neutral | None | None | None | None | I |
S/N | 0.1091 | likely_benign | 0.0997 | benign | -0.32 | Destabilizing | 0.072 | N | 0.292 | neutral | None | None | None | None | I |
S/P | 0.5766 | likely_pathogenic | 0.5747 | pathogenic | -0.09 | Destabilizing | 0.106 | N | 0.483 | neutral | D | 0.534542411 | None | None | I |
S/Q | 0.4017 | ambiguous | 0.3901 | ambiguous | -0.405 | Destabilizing | 0.003 | N | 0.238 | neutral | None | None | None | None | I |
S/R | 0.5094 | ambiguous | 0.5065 | ambiguous | -0.332 | Destabilizing | 0.072 | N | 0.479 | neutral | None | None | None | None | I |
S/T | 0.0646 | likely_benign | 0.0604 | benign | -0.366 | Destabilizing | None | N | 0.164 | neutral | N | 0.456598916 | None | None | I |
S/V | 0.1339 | likely_benign | 0.1329 | benign | -0.09 | Destabilizing | 0.038 | N | 0.493 | neutral | None | None | None | None | I |
S/W | 0.224 | likely_benign | 0.2373 | benign | -0.77 | Destabilizing | 0.864 | D | 0.483 | neutral | None | None | None | None | I |
S/Y | 0.1214 | likely_benign | 0.1247 | benign | -0.458 | Destabilizing | 0.093 | N | 0.471 | neutral | N | 0.509761397 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.