Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22644 | 68155;68156;68157 | chr2:178579100;178579099;178579098 | chr2:179443827;179443826;179443825 |
N2AB | 21003 | 63232;63233;63234 | chr2:178579100;178579099;178579098 | chr2:179443827;179443826;179443825 |
N2A | 20076 | 60451;60452;60453 | chr2:178579100;178579099;178579098 | chr2:179443827;179443826;179443825 |
N2B | 13579 | 40960;40961;40962 | chr2:178579100;178579099;178579098 | chr2:179443827;179443826;179443825 |
Novex-1 | 13704 | 41335;41336;41337 | chr2:178579100;178579099;178579098 | chr2:179443827;179443826;179443825 |
Novex-2 | 13771 | 41536;41537;41538 | chr2:178579100;178579099;178579098 | chr2:179443827;179443826;179443825 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs1366675225 | None | 1.0 | D | 0.809 | 0.793 | 0.891885484271 | gnomAD-4.0.0 | 1.59213E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78087E-05 | None | 0 | 0 | 0 | 0 | 0 |
P/S | None | None | 1.0 | D | 0.737 | 0.788 | 0.744525733801 | gnomAD-4.0.0 | 7.96079E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4299E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9237 | likely_pathogenic | 0.9019 | pathogenic | -1.488 | Destabilizing | 0.999 | D | 0.793 | deleterious | D | 0.611001525 | None | None | N |
P/C | 0.9949 | likely_pathogenic | 0.9939 | pathogenic | -1.956 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
P/D | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -3.3 | Highly Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
P/E | 0.9984 | likely_pathogenic | 0.998 | pathogenic | -3.234 | Highly Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
P/F | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -1.05 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
P/G | 0.9946 | likely_pathogenic | 0.9941 | pathogenic | -1.818 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
P/H | 0.9983 | likely_pathogenic | 0.9977 | pathogenic | -1.293 | Destabilizing | 1.0 | D | 0.771 | deleterious | D | 0.65316441 | None | None | N |
P/I | 0.9959 | likely_pathogenic | 0.9937 | pathogenic | -0.635 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
P/K | 0.9988 | likely_pathogenic | 0.9985 | pathogenic | -1.474 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
P/L | 0.9826 | likely_pathogenic | 0.977 | pathogenic | -0.635 | Destabilizing | 1.0 | D | 0.808 | deleterious | D | 0.636943245 | None | None | N |
P/M | 0.9978 | likely_pathogenic | 0.9969 | pathogenic | -0.891 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
P/N | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -1.812 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
P/Q | 0.9981 | likely_pathogenic | 0.9973 | pathogenic | -1.952 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
P/R | 0.9953 | likely_pathogenic | 0.9945 | pathogenic | -1.031 | Destabilizing | 1.0 | D | 0.809 | deleterious | D | 0.636943245 | None | None | N |
P/S | 0.9941 | likely_pathogenic | 0.992 | pathogenic | -2.12 | Highly Destabilizing | 1.0 | D | 0.737 | deleterious | D | 0.63674144 | None | None | N |
P/T | 0.9892 | likely_pathogenic | 0.985 | pathogenic | -1.952 | Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.652962606 | None | None | N |
P/V | 0.9854 | likely_pathogenic | 0.9799 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
P/W | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -1.423 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
P/Y | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -1.08 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.