Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22669 | 68230;68231;68232 | chr2:178579025;178579024;178579023 | chr2:179443752;179443751;179443750 |
N2AB | 21028 | 63307;63308;63309 | chr2:178579025;178579024;178579023 | chr2:179443752;179443751;179443750 |
N2A | 20101 | 60526;60527;60528 | chr2:178579025;178579024;178579023 | chr2:179443752;179443751;179443750 |
N2B | 13604 | 41035;41036;41037 | chr2:178579025;178579024;178579023 | chr2:179443752;179443751;179443750 |
Novex-1 | 13729 | 41410;41411;41412 | chr2:178579025;178579024;178579023 | chr2:179443752;179443751;179443750 |
Novex-2 | 13796 | 41611;41612;41613 | chr2:178579025;178579024;178579023 | chr2:179443752;179443751;179443750 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs755897447 | 0.447 | 0.942 | N | 0.514 | 0.212 | 0.176091768786 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/N | rs755897447 | 0.447 | 0.942 | N | 0.514 | 0.212 | 0.176091768786 | gnomAD-4.0.0 | 2.73776E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99659E-07 | 1.1595E-05 | 3.31499E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2153 | likely_benign | 0.1795 | benign | 0.081 | Stabilizing | 0.86 | D | 0.536 | neutral | None | None | None | None | N |
K/C | 0.6764 | likely_pathogenic | 0.6379 | pathogenic | -0.193 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/D | 0.5162 | ambiguous | 0.4376 | ambiguous | -0.058 | Destabilizing | 0.754 | D | 0.567 | neutral | None | None | None | None | N |
K/E | 0.1177 | likely_benign | 0.0968 | benign | -0.069 | Destabilizing | 0.014 | N | 0.251 | neutral | N | 0.471303717 | None | None | N |
K/F | 0.7627 | likely_pathogenic | 0.6998 | pathogenic | -0.211 | Destabilizing | 0.993 | D | 0.661 | neutral | None | None | None | None | N |
K/G | 0.4005 | ambiguous | 0.3363 | benign | -0.08 | Destabilizing | 0.86 | D | 0.529 | neutral | None | None | None | None | N |
K/H | 0.3782 | ambiguous | 0.3433 | ambiguous | -0.294 | Destabilizing | 0.994 | D | 0.557 | neutral | None | None | None | None | N |
K/I | 0.2433 | likely_benign | 0.2033 | benign | 0.419 | Stabilizing | 0.956 | D | 0.673 | neutral | None | None | None | None | N |
K/L | 0.251 | likely_benign | 0.2114 | benign | 0.419 | Stabilizing | 0.86 | D | 0.529 | neutral | None | None | None | None | N |
K/M | 0.1901 | likely_benign | 0.1637 | benign | 0.174 | Stabilizing | 0.997 | D | 0.561 | neutral | N | 0.472689139 | None | None | N |
K/N | 0.4248 | ambiguous | 0.3445 | ambiguous | 0.272 | Stabilizing | 0.942 | D | 0.514 | neutral | N | 0.519001664 | None | None | N |
K/P | 0.6727 | likely_pathogenic | 0.6126 | pathogenic | 0.332 | Stabilizing | 0.978 | D | 0.557 | neutral | None | None | None | None | N |
K/Q | 0.1278 | likely_benign | 0.1138 | benign | 0.09 | Stabilizing | 0.89 | D | 0.542 | neutral | N | 0.502397415 | None | None | N |
K/R | 0.0863 | likely_benign | 0.0851 | benign | 0.031 | Stabilizing | 0.822 | D | 0.565 | neutral | N | 0.496586164 | None | None | N |
K/S | 0.346 | ambiguous | 0.2823 | benign | -0.155 | Destabilizing | 0.754 | D | 0.548 | neutral | None | None | None | None | N |
K/T | 0.1474 | likely_benign | 0.1169 | benign | -0.034 | Destabilizing | 0.058 | N | 0.318 | neutral | N | 0.490486911 | None | None | N |
K/V | 0.1902 | likely_benign | 0.1621 | benign | 0.332 | Stabilizing | 0.956 | D | 0.533 | neutral | None | None | None | None | N |
K/W | 0.7824 | likely_pathogenic | 0.756 | pathogenic | -0.269 | Destabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/Y | 0.6762 | likely_pathogenic | 0.6198 | pathogenic | 0.095 | Stabilizing | 0.993 | D | 0.635 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.