Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22686 | 68281;68282;68283 | chr2:178578974;178578973;178578972 | chr2:179443701;179443700;179443699 |
N2AB | 21045 | 63358;63359;63360 | chr2:178578974;178578973;178578972 | chr2:179443701;179443700;179443699 |
N2A | 20118 | 60577;60578;60579 | chr2:178578974;178578973;178578972 | chr2:179443701;179443700;179443699 |
N2B | 13621 | 41086;41087;41088 | chr2:178578974;178578973;178578972 | chr2:179443701;179443700;179443699 |
Novex-1 | 13746 | 41461;41462;41463 | chr2:178578974;178578973;178578972 | chr2:179443701;179443700;179443699 |
Novex-2 | 13813 | 41662;41663;41664 | chr2:178578974;178578973;178578972 | chr2:179443701;179443700;179443699 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.007 | N | 0.137 | 0.049 | 0.0762999501168 | gnomAD-4.0.0 | 1.59237E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0947 | likely_benign | 0.0861 | benign | -0.715 | Destabilizing | 0.002 | N | 0.137 | neutral | N | 0.453718034 | None | None | N |
S/C | 0.1258 | likely_benign | 0.1146 | benign | -0.433 | Destabilizing | 0.97 | D | 0.412 | neutral | N | 0.512054262 | None | None | N |
S/D | 0.476 | ambiguous | 0.4084 | ambiguous | -0.599 | Destabilizing | 0.447 | N | 0.245 | neutral | None | None | None | None | N |
S/E | 0.6503 | likely_pathogenic | 0.5912 | pathogenic | -0.605 | Destabilizing | 0.617 | D | 0.256 | neutral | None | None | None | None | N |
S/F | 0.3653 | ambiguous | 0.3241 | benign | -0.881 | Destabilizing | 0.896 | D | 0.524 | neutral | N | 0.501146622 | None | None | N |
S/G | 0.092 | likely_benign | 0.0873 | benign | -0.968 | Destabilizing | 0.25 | N | 0.296 | neutral | None | None | None | None | N |
S/H | 0.365 | ambiguous | 0.3176 | benign | -1.503 | Destabilizing | 0.85 | D | 0.421 | neutral | None | None | None | None | N |
S/I | 0.1723 | likely_benign | 0.1515 | benign | -0.146 | Destabilizing | 0.85 | D | 0.497 | neutral | None | None | None | None | N |
S/K | 0.6806 | likely_pathogenic | 0.6042 | pathogenic | -0.896 | Destabilizing | 0.447 | N | 0.271 | neutral | None | None | None | None | N |
S/L | 0.1524 | likely_benign | 0.1361 | benign | -0.146 | Destabilizing | 0.447 | N | 0.451 | neutral | None | None | None | None | N |
S/M | 0.2292 | likely_benign | 0.217 | benign | 0.225 | Stabilizing | 0.972 | D | 0.418 | neutral | None | None | None | None | N |
S/N | 0.1273 | likely_benign | 0.1127 | benign | -0.832 | Destabilizing | 0.002 | N | 0.137 | neutral | None | None | None | None | N |
S/P | 0.431 | ambiguous | 0.3817 | ambiguous | -0.301 | Destabilizing | 0.896 | D | 0.385 | neutral | N | 0.46947692 | None | None | N |
S/Q | 0.5348 | ambiguous | 0.4946 | ambiguous | -0.985 | Destabilizing | 0.85 | D | 0.369 | neutral | None | None | None | None | N |
S/R | 0.595 | likely_pathogenic | 0.5232 | ambiguous | -0.756 | Destabilizing | 0.617 | D | 0.386 | neutral | None | None | None | None | N |
S/T | 0.0849 | likely_benign | 0.0816 | benign | -0.787 | Destabilizing | 0.007 | N | 0.137 | neutral | N | 0.422837767 | None | None | N |
S/V | 0.1888 | likely_benign | 0.1683 | benign | -0.301 | Destabilizing | 0.447 | N | 0.459 | neutral | None | None | None | None | N |
S/W | 0.5332 | ambiguous | 0.4887 | ambiguous | -0.895 | Destabilizing | 0.992 | D | 0.568 | neutral | None | None | None | None | N |
S/Y | 0.2978 | likely_benign | 0.2555 | benign | -0.645 | Destabilizing | 0.963 | D | 0.522 | neutral | N | 0.517577512 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.