Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22688 | 68287;68288;68289 | chr2:178578968;178578967;178578966 | chr2:179443695;179443694;179443693 |
N2AB | 21047 | 63364;63365;63366 | chr2:178578968;178578967;178578966 | chr2:179443695;179443694;179443693 |
N2A | 20120 | 60583;60584;60585 | chr2:178578968;178578967;178578966 | chr2:179443695;179443694;179443693 |
N2B | 13623 | 41092;41093;41094 | chr2:178578968;178578967;178578966 | chr2:179443695;179443694;179443693 |
Novex-1 | 13748 | 41467;41468;41469 | chr2:178578968;178578967;178578966 | chr2:179443695;179443694;179443693 |
Novex-2 | 13815 | 41668;41669;41670 | chr2:178578968;178578967;178578966 | chr2:179443695;179443694;179443693 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | rs748527420 | 0.098 | 0.491 | N | 0.345 | 0.174 | 0.37762505005 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
N/I | rs748527420 | 0.098 | 0.491 | N | 0.345 | 0.174 | 0.37762505005 | gnomAD-4.0.0 | 6.36947E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.73148E-05 | 0 |
N/K | None | None | 0.166 | N | 0.175 | 0.098 | 0.143124449307 | gnomAD-4.0.0 | 1.59238E-06 | None | None | None | None | N | None | 0 | 2.2876E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2373 | likely_benign | 0.1908 | benign | -0.305 | Destabilizing | 0.007 | N | 0.127 | neutral | None | None | None | None | N |
N/C | 0.2519 | likely_benign | 0.2199 | benign | 0.401 | Stabilizing | 0.965 | D | 0.312 | neutral | None | None | None | None | N |
N/D | 0.2328 | likely_benign | 0.1922 | benign | -0.038 | Destabilizing | None | N | 0.058 | neutral | N | 0.403019855 | None | None | N |
N/E | 0.5415 | ambiguous | 0.4569 | ambiguous | -0.079 | Destabilizing | 0.209 | N | 0.185 | neutral | None | None | None | None | N |
N/F | 0.6309 | likely_pathogenic | 0.5284 | ambiguous | -0.685 | Destabilizing | 0.901 | D | 0.372 | neutral | None | None | None | None | N |
N/G | 0.2472 | likely_benign | 0.2158 | benign | -0.474 | Destabilizing | 0.103 | N | 0.181 | neutral | None | None | None | None | N |
N/H | 0.1056 | likely_benign | 0.0917 | benign | -0.552 | Destabilizing | 0.873 | D | 0.19 | neutral | N | 0.443367755 | None | None | N |
N/I | 0.418 | ambiguous | 0.3246 | benign | 0.053 | Stabilizing | 0.491 | N | 0.345 | neutral | N | 0.500261187 | None | None | N |
N/K | 0.4215 | ambiguous | 0.3312 | benign | 0.056 | Stabilizing | 0.166 | N | 0.175 | neutral | N | 0.416661156 | None | None | N |
N/L | 0.2888 | likely_benign | 0.2368 | benign | 0.053 | Stabilizing | 0.209 | N | 0.266 | neutral | None | None | None | None | N |
N/M | 0.3792 | ambiguous | 0.3086 | benign | 0.438 | Stabilizing | 0.965 | D | 0.297 | neutral | None | None | None | None | N |
N/P | 0.7522 | likely_pathogenic | 0.7102 | pathogenic | -0.04 | Destabilizing | 0.722 | D | 0.279 | neutral | None | None | None | None | N |
N/Q | 0.3635 | ambiguous | 0.2996 | benign | -0.364 | Destabilizing | 0.561 | D | 0.154 | neutral | None | None | None | None | N |
N/R | 0.4147 | ambiguous | 0.3343 | benign | 0.121 | Stabilizing | 0.004 | N | 0.121 | neutral | None | None | None | None | N |
N/S | 0.0849 | likely_benign | 0.0767 | benign | -0.097 | Destabilizing | 0.005 | N | 0.093 | neutral | N | 0.389031837 | None | None | N |
N/T | 0.1166 | likely_benign | 0.0988 | benign | -0.003 | Destabilizing | 0.002 | N | 0.062 | neutral | N | 0.376700045 | None | None | N |
N/V | 0.3898 | ambiguous | 0.3085 | benign | -0.04 | Destabilizing | 0.209 | N | 0.243 | neutral | None | None | None | None | N |
N/W | 0.755 | likely_pathogenic | 0.7081 | pathogenic | -0.684 | Destabilizing | 0.991 | D | 0.321 | neutral | None | None | None | None | N |
N/Y | 0.2124 | likely_benign | 0.1717 | benign | -0.419 | Destabilizing | 0.954 | D | 0.341 | neutral | N | 0.481675427 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.