Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2269 | 7030;7031;7032 | chr2:178774459;178774458;178774457 | chr2:179639186;179639185;179639184 |
N2AB | 2269 | 7030;7031;7032 | chr2:178774459;178774458;178774457 | chr2:179639186;179639185;179639184 |
N2A | 2269 | 7030;7031;7032 | chr2:178774459;178774458;178774457 | chr2:179639186;179639185;179639184 |
N2B | 2223 | 6892;6893;6894 | chr2:178774459;178774458;178774457 | chr2:179639186;179639185;179639184 |
Novex-1 | 2223 | 6892;6893;6894 | chr2:178774459;178774458;178774457 | chr2:179639186;179639185;179639184 |
Novex-2 | 2223 | 6892;6893;6894 | chr2:178774459;178774458;178774457 | chr2:179639186;179639185;179639184 |
Novex-3 | 2269 | 7030;7031;7032 | chr2:178774459;178774458;178774457 | chr2:179639186;179639185;179639184 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs1340770955 | -2.748 | 0.986 | D | 0.593 | 0.844 | 0.848023011964 | gnomAD-2.1.1 | 8.01E-06 | None | None | None | None | N | None | 6.2E-05 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
F/S | rs1340770955 | -2.748 | 0.986 | D | 0.593 | 0.844 | 0.848023011964 | gnomAD-4.0.0 | 3.18768E-06 | None | None | None | None | N | None | 5.65483E-05 | 2.28802E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8668 | likely_pathogenic | 0.8575 | pathogenic | -2.586 | Highly Destabilizing | 0.863 | D | 0.506 | neutral | None | None | None | None | N |
F/C | 0.7542 | likely_pathogenic | 0.7587 | pathogenic | -1.462 | Destabilizing | 0.999 | D | 0.644 | neutral | D | 0.563828782 | None | None | N |
F/D | 0.98 | likely_pathogenic | 0.9779 | pathogenic | -1.796 | Destabilizing | 0.997 | D | 0.665 | neutral | None | None | None | None | N |
F/E | 0.9804 | likely_pathogenic | 0.9787 | pathogenic | -1.676 | Destabilizing | 0.997 | D | 0.658 | neutral | None | None | None | None | N |
F/G | 0.9665 | likely_pathogenic | 0.963 | pathogenic | -2.969 | Highly Destabilizing | 0.997 | D | 0.643 | neutral | None | None | None | None | N |
F/H | 0.9366 | likely_pathogenic | 0.9284 | pathogenic | -1.234 | Destabilizing | 0.999 | D | 0.54 | neutral | None | None | None | None | N |
F/I | 0.2743 | likely_benign | 0.2781 | benign | -1.398 | Destabilizing | 0.134 | N | 0.229 | neutral | N | 0.472658216 | None | None | N |
F/K | 0.9824 | likely_pathogenic | 0.9805 | pathogenic | -1.641 | Destabilizing | 0.997 | D | 0.65 | neutral | None | None | None | None | N |
F/L | 0.8745 | likely_pathogenic | 0.8698 | pathogenic | -1.398 | Destabilizing | 0.005 | N | 0.159 | neutral | D | 0.524940871 | None | None | N |
F/M | 0.6039 | likely_pathogenic | 0.5969 | pathogenic | -1.03 | Destabilizing | 0.982 | D | 0.441 | neutral | None | None | None | None | N |
F/N | 0.9228 | likely_pathogenic | 0.9154 | pathogenic | -1.764 | Destabilizing | 0.997 | D | 0.677 | prob.neutral | None | None | None | None | N |
F/P | 0.9766 | likely_pathogenic | 0.9757 | pathogenic | -1.793 | Destabilizing | 0.997 | D | 0.679 | prob.neutral | None | None | None | None | N |
F/Q | 0.9756 | likely_pathogenic | 0.973 | pathogenic | -1.837 | Destabilizing | 0.997 | D | 0.679 | prob.neutral | None | None | None | None | N |
F/R | 0.9684 | likely_pathogenic | 0.9649 | pathogenic | -0.947 | Destabilizing | 0.997 | D | 0.677 | prob.neutral | None | None | None | None | N |
F/S | 0.8946 | likely_pathogenic | 0.8839 | pathogenic | -2.553 | Highly Destabilizing | 0.986 | D | 0.593 | neutral | D | 0.56325414 | None | None | N |
F/T | 0.8238 | likely_pathogenic | 0.8104 | pathogenic | -2.334 | Highly Destabilizing | 0.969 | D | 0.585 | neutral | None | None | None | None | N |
F/V | 0.3777 | ambiguous | 0.3836 | ambiguous | -1.793 | Destabilizing | 0.704 | D | 0.437 | neutral | N | 0.448486524 | None | None | N |
F/W | 0.693 | likely_pathogenic | 0.6828 | pathogenic | -0.49 | Destabilizing | 0.999 | D | 0.453 | neutral | None | None | None | None | N |
F/Y | 0.3889 | ambiguous | 0.3704 | ambiguous | -0.771 | Destabilizing | 0.986 | D | 0.445 | neutral | D | 0.56340713 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.