Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22706 | 68341;68342;68343 | chr2:178578914;178578913;178578912 | chr2:179443641;179443640;179443639 |
N2AB | 21065 | 63418;63419;63420 | chr2:178578914;178578913;178578912 | chr2:179443641;179443640;179443639 |
N2A | 20138 | 60637;60638;60639 | chr2:178578914;178578913;178578912 | chr2:179443641;179443640;179443639 |
N2B | 13641 | 41146;41147;41148 | chr2:178578914;178578913;178578912 | chr2:179443641;179443640;179443639 |
Novex-1 | 13766 | 41521;41522;41523 | chr2:178578914;178578913;178578912 | chr2:179443641;179443640;179443639 |
Novex-2 | 13833 | 41722;41723;41724 | chr2:178578914;178578913;178578912 | chr2:179443641;179443640;179443639 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs765762900 | 0.119 | 0.004 | N | 0.315 | 0.116 | 0.242825505644 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
T/I | rs765762900 | 0.119 | 0.004 | N | 0.315 | 0.116 | 0.242825505644 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs765762900 | 0.119 | 0.004 | N | 0.315 | 0.116 | 0.242825505644 | gnomAD-4.0.0 | 2.564E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78962E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1546 | likely_benign | 0.0909 | benign | -0.498 | Destabilizing | 0.055 | N | 0.51 | neutral | N | 0.510710254 | None | None | N |
T/C | 0.5221 | ambiguous | 0.3622 | ambiguous | -0.424 | Destabilizing | 0.968 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/D | 0.8449 | likely_pathogenic | 0.6473 | pathogenic | 0.178 | Stabilizing | 0.726 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/E | 0.7914 | likely_pathogenic | 0.5812 | pathogenic | 0.163 | Stabilizing | 0.726 | D | 0.667 | neutral | None | None | None | None | N |
T/F | 0.4998 | ambiguous | 0.2888 | benign | -0.622 | Destabilizing | 0.567 | D | 0.769 | deleterious | None | None | None | None | N |
T/G | 0.28 | likely_benign | 0.1541 | benign | -0.727 | Destabilizing | 0.567 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/H | 0.5705 | likely_pathogenic | 0.3544 | ambiguous | -0.911 | Destabilizing | 0.968 | D | 0.761 | deleterious | None | None | None | None | N |
T/I | 0.3373 | likely_benign | 0.1927 | benign | 0.005 | Stabilizing | 0.004 | N | 0.315 | neutral | N | 0.502418845 | None | None | N |
T/K | 0.6511 | likely_pathogenic | 0.4303 | ambiguous | -0.547 | Destabilizing | 0.567 | D | 0.671 | neutral | None | None | None | None | N |
T/L | 0.1478 | likely_benign | 0.0916 | benign | 0.005 | Stabilizing | 0.026 | N | 0.477 | neutral | None | None | None | None | N |
T/M | 0.1137 | likely_benign | 0.0787 | benign | 0.022 | Stabilizing | 0.026 | N | 0.43 | neutral | None | None | None | None | N |
T/N | 0.2366 | likely_benign | 0.1339 | benign | -0.441 | Destabilizing | 0.667 | D | 0.581 | neutral | N | 0.505437721 | None | None | N |
T/P | 0.1434 | likely_benign | 0.0916 | benign | -0.13 | Destabilizing | 0.859 | D | 0.735 | prob.delet. | N | 0.473730734 | None | None | N |
T/Q | 0.4701 | ambiguous | 0.3104 | benign | -0.57 | Destabilizing | 0.567 | D | 0.737 | prob.delet. | None | None | None | None | N |
T/R | 0.646 | likely_pathogenic | 0.4086 | ambiguous | -0.309 | Destabilizing | 0.567 | D | 0.734 | prob.delet. | None | None | None | None | N |
T/S | 0.1701 | likely_benign | 0.0982 | benign | -0.715 | Destabilizing | 0.22 | N | 0.493 | neutral | N | 0.469207562 | None | None | N |
T/V | 0.2396 | likely_benign | 0.1463 | benign | -0.13 | Destabilizing | 0.072 | N | 0.445 | neutral | None | None | None | None | N |
T/W | 0.8233 | likely_pathogenic | 0.6288 | pathogenic | -0.602 | Destabilizing | 0.968 | D | 0.773 | deleterious | None | None | None | None | N |
T/Y | 0.5683 | likely_pathogenic | 0.3596 | ambiguous | -0.348 | Destabilizing | 0.726 | D | 0.776 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.